Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1 212 8e-50 seq2 120 4e-22 seq3 104 3e-17 >seq1 Length=8587311 Score = 212 bits (234), Expect = 8e-50 Identities = 707/1079 (66%), Gaps = 27/1079 (3%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||| | ||||| ||||| |||||||||||| |||| ||||| || | Sbjct 4411959 TAGATGTTCGAGGTGTAAGGCTCGAAGCACTCATTGAAGCCCAGAATTTGACTGGTACTG 4411900 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || || |||||||| || | | || |||||||||| ||| | | ||| || Sbjct 4411899 GCAGTAGGCATGGGGGCAACCAACAGACTGTTGCGGACACCAGTCTCGGCAATCTTGGCC 4411840 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTT-GTCTCCCCCTCCCACATATCAAACTGGAG 116081 || |||| | ||||||| || || | | | | |||||||| || |||| || Sbjct 4411839 TTCAGGGAGGCCCAGTCCCAGA-GATCGGTAGGGGTGCGGTCCCACATGTCGTACTGCAG 4411781 Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC-GCCA 116140 ||| || || || | || || || | |||||||| || ||| | | || | || Sbjct 4411780 GATGCCCTGCGAGACGGGAGAGCCAGGGTAAGTCTCATAGGGACCC--AGCTTCTTGGCA 4411723 Query 116141 AT-TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-T 116198 || |||| | || | ||| |||| || || ||||| || || | || | | Sbjct 4411722 ATCTCGGCGGAAGCAGTCAAGGCACCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGT 4411663 Query 116199 TGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAA-ATAAATACATCCGCGAGAC 116257 || || ||||||| || || |||| ||||| || | | || |||| || |||| Sbjct 4411662 TGTCT-GGCCTCGGGAGAGTCGAACGGCAGACG-CAGAGCCAGGAAAGCATCAGCAAGAC 4411605 Query 116258 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---A 116314 | | ||||||||| | || ||||| || | | || ||| || ||| | Sbjct 4411604 CGTTGACACCGAGAGCGATGGGGCGGTGACGGAAGTTGCTCTTCTTCGC---CTCAGGAA 4411548 Query 116315 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 116374 |||| || | || |||| || | | | || ||||| | || ||||| || | Sbjct 4411547 CGGGGTAGTAGTTGATATCAATGATCTTGTTCAGATTGTGCACGAGAACCTGGACGACCT 4411488 Query 116375 CATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA---TTGACATACTTAGGAAGGG 116431 | || ||||| || ||||| | || || || | || | |||||| | || |||| Sbjct 4411487 CGTGGAGCTTGCCGAAATCATA-CT-CGCCTCGCG-CAGAGTCGACATAGGTGGGGAGGG 4411431 Query 116432 CGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 116491 ||| || ||||| || || |||| |||||| | ||||||| ||||| || | Sbjct 4411430 CGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACTGTACTCGATAATCTCAG 4411371 Query 116492 TACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACG 116551 | |||| || || || ||| || |||| |||||| || || ||| |||| || | Sbjct 4411370 TGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAG 4411311 Query 116552 CATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 116611 |||||||||||||||| | || | || ||||| || |||| || |||||| || | || Sbjct 4411310 CATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCGTACC 4411251 Query 116612 ATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAG 116670 | | | || | | || | | || | | | || ||||||| ||||||||| | |||| Sbjct 4411250 AGAGCTTCTGAGCCTTG-ATGGTCTTGCGGCCACGGCCCTCCTGCTCGTACTTGGCGTAG 4411192 Query 116671 AGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAG 116730 || ||||| ||||| ||||| | || | || || || |||| || || |||||| Sbjct 4411191 AGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGGGGCAGAAG 4411132 Query 116731 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 116790 || | ||| | ||| |||| || |||||||||||||| || ||| |||| || || Sbjct 4411131 AGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCCACAGAGCG 4411072 Query 116791 GAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 116850 |||| || || ||| |||| | || || | || ||||| |||| || | || Sbjct 4411071 TAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGATCGAGGAAC 4411012 Query 116851 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGA 116907 || | || ||| ||||||||||| |||||||| | || | | || ||| | Sbjct 4411011 TCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTA 4410952 Query 116908 CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACC 116966 ||| |||||| ||||| | || || |||||| || || ||||| |||| ||||| Sbjct 4410951 CCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACC 4410893 >seq2 Length=5360957 Score = 120 bits (132), Expect = 4e-22 Identities = 117/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || |||||||||||| ||||||||||| | || || ||||| ||||| Sbjct 1779397 AGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACC 1779338 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||| || || |||||||||| |||||| || | |||||||| ||||||||||| Sbjct 1779337 AGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGAT 1779278 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGC 127669 ||||||||| ||||| |||| |||||| Sbjct 1779277 ACCCTCCACAGCGGCGAAGGCAACCAGACGC 1779247 >seq3 Length=5002383 Score = 104 bits (114), Expect = 3e-17 Identities = 330/504 (65%), Gaps = 27/504 (5%) Strand=Plus/Minus Query 12702 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 12761 || ||||| || || || || | ||| || | |||||| | ||| || || || | Sbjct 3509536 CGGTCAAATCGTCCGGGACGCATGAGTGCCTTGTCAAGAACATCCGGTCGATTGGTACCA 3509477 Query 12762 GCGATGACAACGA--TGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAGTTGAT 12819 || | |||||| | ||| | | ||| ||| |||||||||||||| | | || | Sbjct 3509476 GCCAAGACAACCACTTGCTCAGA--GGTATTGAAACCATCCATCTCAGTGAGAATCTGGT 3509419 Query 12820 TGATGGTTTGTTCACGTTCATCATTCGCGGGCATACCACC--CGCACTGCGTTGCT---- 12873 ||| || |||||||||||| || | |||||| || | | ||||| Sbjct 3509418 TGAGAGTGCTTTCACGTTCATCGTTTCC------ACCACCAACGTTCGACTTTGCTCGAG 3509365 Query 12874 ---TACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAA 12930 | || | || |||||||| |||||||| | ||| || || ||| | ||||| Sbjct 3509364 ACTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCGG 3509305 Query 12931 CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG 12990 | | |||| ||| || || | || |||||||| |||||||| || ||||| | || Sbjct 3509304 TTGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCGG 3509245 Query 12991 --CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAG 13048 | | || || || | ||| || ||| ||||||||| || |||| || || | Sbjct 3509244 AACCACTGA-CACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCAA 3509187 Query 13049 GGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC--A 13106 ||||| || || || || || | ||||| ||||||||| || ||| | ||||| | Sbjct 3509186 TGTCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCAA 3509127 Query 13107 CTTCCAAAGTAGCGCTCGGGTTGTTTAAGAAAGTCCACGATTTCTTCCAATTCATCCTTC 13166 |||| | | ||||||||||| | || ||| |||| ||| | ||| |||| Sbjct 3509126 CTTCTCGA--ACCGCTCGGGTTGCTGGAGGAAGCTAACGAATTCCATGATCTCAACCTTG 3509069 Query 13167 GCGGCGTCGATGCCTTCAACGTCA 13190 || |||| || || |||||||| Sbjct 3509068 GCTTCGTCCATACCAGCAACGTCA 3509045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507077298560