Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1 212 8e-50
seq2 120 4e-22
seq3 104 3e-17
>seq1
Length=8587311
Score = 212 bits (234), Expect = 8e-50
Identities = 707/1079 (66%), Gaps = 27/1079 (3%)
Strand=Plus/Minus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|||||||| | ||||| ||||| |||||||||||| |||| ||||| || |
Sbjct 4411959 TAGATGTTCGAGGTGTAAGGCTCGAAGCACTCATTGAAGCCCAGAATTTGACTGGTACTG 4411900
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
|| || |||||||| || | | || |||||||||| ||| | | ||| ||
Sbjct 4411899 GCAGTAGGCATGGGGGCAACCAACAGACTGTTGCGGACACCAGTCTCGGCAATCTTGGCC 4411840
Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTT-GTCTCCCCCTCCCACATATCAAACTGGAG 116081
|| |||| | ||||||| || || | | | | |||||||| || |||| ||
Sbjct 4411839 TTCAGGGAGGCCCAGTCCCAGA-GATCGGTAGGGGTGCGGTCCCACATGTCGTACTGCAG 4411781
Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC-GCCA 116140
||| || || || | || || || | |||||||| || ||| | | || | ||
Sbjct 4411780 GATGCCCTGCGAGACGGGAGAGCCAGGGTAAGTCTCATAGGGACCC--AGCTTCTTGGCA 4411723
Query 116141 AT-TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-T 116198
|| |||| | || | ||| |||| || || ||||| || || | || | |
Sbjct 4411722 ATCTCGGCGGAAGCAGTCAAGGCACCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGT 4411663
Query 116199 TGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAA-ATAAATACATCCGCGAGAC 116257
|| || ||||||| || || |||| ||||| || | | || |||| || ||||
Sbjct 4411662 TGTCT-GGCCTCGGGAGAGTCGAACGGCAGACG-CAGAGCCAGGAAAGCATCAGCAAGAC 4411605
Query 116258 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---A 116314
| | ||||||||| | || ||||| || | | || ||| || ||| |
Sbjct 4411604 CGTTGACACCGAGAGCGATGGGGCGGTGACGGAAGTTGCTCTTCTTCGC---CTCAGGAA 4411548
Query 116315 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 116374
|||| || | || |||| || | | | || ||||| | || ||||| || |
Sbjct 4411547 CGGGGTAGTAGTTGATATCAATGATCTTGTTCAGATTGTGCACGAGAACCTGGACGACCT 4411488
Query 116375 CATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA---TTGACATACTTAGGAAGGG 116431
| || ||||| || ||||| | || || || | || | |||||| | || ||||
Sbjct 4411487 CGTGGAGCTTGCCGAAATCATA-CT-CGCCTCGCG-CAGAGTCGACATAGGTGGGGAGGG 4411431
Query 116432 CGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 116491
||| || ||||| || || |||| |||||| | ||||||| ||||| || |
Sbjct 4411430 CGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACTGTACTCGATAATCTCAG 4411371
Query 116492 TACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACG 116551
| |||| || || || ||| || |||| |||||| || || ||| |||| || |
Sbjct 4411370 TGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAG 4411311
Query 116552 CATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 116611
|||||||||||||||| | || | || ||||| || |||| || |||||| || | ||
Sbjct 4411310 CATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCGTACC 4411251
Query 116612 ATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAG 116670
| | | || | | || | | || | | | || ||||||| ||||||||| | ||||
Sbjct 4411250 AGAGCTTCTGAGCCTTG-ATGGTCTTGCGGCCACGGCCCTCCTGCTCGTACTTGGCGTAG 4411192
Query 116671 AGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAG 116730
|| ||||| ||||| ||||| | || | || || || |||| || || ||||||
Sbjct 4411191 AGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGGGGCAGAAG 4411132
Query 116731 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 116790
|| | ||| | ||| |||| || |||||||||||||| || ||| |||| || ||
Sbjct 4411131 AGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCCACAGAGCG 4411072
Query 116791 GAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 116850
|||| || || ||| |||| | || || | || ||||| |||| || | ||
Sbjct 4411071 TAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGATCGAGGAAC 4411012
Query 116851 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGA 116907
|| | || ||| ||||||||||| |||||||| | || | | || ||| |
Sbjct 4411011 TCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTA 4410952
Query 116908 CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACC 116966
||| |||||| ||||| | || || |||||| || || ||||| |||| |||||
Sbjct 4410951 CCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACC 4410893
>seq2
Length=5360957
Score = 120 bits (132), Expect = 4e-22
Identities = 117/151 (77%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || |||||||||||| ||||||||||| | || || ||||| |||||
Sbjct 1779397 AGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACC 1779338
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
||||| || || |||||||||| |||||| || | |||||||| |||||||||||
Sbjct 1779337 AGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGAT 1779278
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGC 127669
||||||||| ||||| |||| ||||||
Sbjct 1779277 ACCCTCCACAGCGGCGAAGGCAACCAGACGC 1779247
>seq3
Length=5002383
Score = 104 bits (114), Expect = 3e-17
Identities = 330/504 (65%), Gaps = 27/504 (5%)
Strand=Plus/Minus
Query 12702 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 12761
|| ||||| || || || || | ||| || | |||||| | ||| || || || |
Sbjct 3509536 CGGTCAAATCGTCCGGGACGCATGAGTGCCTTGTCAAGAACATCCGGTCGATTGGTACCA 3509477
Query 12762 GCGATGACAACGA--TGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAGTTGAT 12819
|| | |||||| | ||| | | ||| ||| |||||||||||||| | | || |
Sbjct 3509476 GCCAAGACAACCACTTGCTCAGA--GGTATTGAAACCATCCATCTCAGTGAGAATCTGGT 3509419
Query 12820 TGATGGTTTGTTCACGTTCATCATTCGCGGGCATACCACC--CGCACTGCGTTGCT---- 12873
||| || |||||||||||| || | |||||| || | | |||||
Sbjct 3509418 TGAGAGTGCTTTCACGTTCATCGTTTCC------ACCACCAACGTTCGACTTTGCTCGAG 3509365
Query 12874 ---TACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAA 12930
| || | || |||||||| |||||||| | ||| || || ||| | |||||
Sbjct 3509364 ACTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCGG 3509305
Query 12931 CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG 12990
| | |||| ||| || || | || |||||||| |||||||| || ||||| | ||
Sbjct 3509304 TTGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCGG 3509245
Query 12991 --CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAG 13048
| | || || || | ||| || ||| ||||||||| || |||| || || |
Sbjct 3509244 AACCACTGA-CACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCAA 3509187
Query 13049 GGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC--A 13106
||||| || || || || || | ||||| ||||||||| || ||| | ||||| |
Sbjct 3509186 TGTCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCAA 3509127
Query 13107 CTTCCAAAGTAGCGCTCGGGTTGTTTAAGAAAGTCCACGATTTCTTCCAATTCATCCTTC 13166
|||| | | ||||||||||| | || ||| |||| ||| | ||| ||||
Sbjct 3509126 CTTCTCGA--ACCGCTCGGGTTGCTGGAGGAAGCTAACGAATTCCATGATCTCAACCTTG 3509069
Query 13167 GCGGCGTCGATGCCTTCAACGTCA 13190
|| |||| || || ||||||||
Sbjct 3509068 GCTTCGTCCATACCAGCAACGTCA 3509045
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613507077298560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |