Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq1 141 1e-28
seq2 123 4e-23
>seq1
Length=8587311
Score = 141 bits (156), Expect = 1e-28
Identities = 478/727 (66%), Gaps = 22/727 (3%)
Strand=Plus/Minus
Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTC 203902
|| || |||||||| |||| | ||| | | || | | ||| |||||||||||||||
Sbjct 4412343 TCAACGGTGAACTGGATGGGGGCGGAGGCGGCCATGGTACGCAGGTAGTACATGCCGGTC 4412284
Query 203903 TTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCG 203962
|| | ||| ||| ||| ||| | ||||||| | ||| |||| || | |||| ||
Sbjct 4412283 TTCAAACCCATCTTCCAGCCGGCGAAGTGCATGCTGGTCAGCTTGCCCATGGTGGGCTCC 4412224
Query 203963 GCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCAT 204021
|| ||| ||||| || ||||| || |||||| ||||| || ||||| ||||||||
Sbjct 4412223 TTCAAGTGGATGTTGAGGGACTGCGACTGATCGATG-AAGGCACCGCGATCGGCGGCCAT 4412165
Query 204022 ATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGT-GTT 204080
| | |||| | ||| || |||||||| || |||||| ||| | | || | | |
Sbjct 4412164 CTGTAGAATGTTGCGCTGGGAGATCTCCCAAACGGTCTTGTACAGGGCCTTGATATCGGC 4412105
Query 204081 GAGGCACATCTT-CCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGT 204138
| || || || | || || || |||||| ||||| || | | || || |
Sbjct 4412104 GGGG---ATGTTAGGGATGTTCTGGACGGAGCCGCCATCGGCGATGATACGGTTCTTCAT 4412048
Query 204139 CTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTG 204198
| || ||||| ||| | || ||| ||| || || ||||||| ||||||
Sbjct 4412047 GTTGTCGGACCACAGGCCGAGGTCGACCAGATCCTTCAGGAGCCAAGGGTTGACGATCTG 4411988
Query 204199 AAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTC 204258
|| || || | ||| || | |||| | | | ||| |||| | || ||||| |||
Sbjct 4411987 GAACTCACCAGCCAGAACACGGCGGGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTC 4411928
Query 204259 GTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTT 204318
||| ||| | ||| ||| ||| ||||| || |||||||| || | | ||| |||
Sbjct 4411927 ATTGAAGCCCAGAATTTGACTGGTACTGGCAGTAGGCATGGGGGCAACCAACAGACTGTT 4411868
Query 204319 GCGCACACCGTATTTTTGG--ACCCTGCGCTTCAGAGAGGTCCAGTC---GTGCATCGCA 204373
||| ||||| | | | || | | || |||||| |||| |||||| | | ||||
Sbjct 4411867 GCGGACACC--AGTCTCGGCAATCTTGGCCTTCAGGGAGGCCCAGTCCCAGAG-ATCG-- 4411813
Query 204374 CTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTG 204433
| || | | ||||||||||| |||| | |||||| || ||| || ||| |
Sbjct 4411812 GTAGGGGTGCGGTCCCACATGTCGTACTGCAGGATGCCCTGCGAGACGGGAGAGCCAGGG 4411753
Query 204434 TACGTCGGATAAGG-CTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATA 204492
|| ||| ||| || | | | |||| || | || | || || | || ||| |
Sbjct 4411752 TAAGTCTCATAGGGACCCAGCTTCTT-GGCAATCTCGGCGGAAGCAGTCAAGGCACCGTG 4411694
Query 204493 GTACATGGTCTCAAAGATCTGAACGTTTAATCTGGC-GGCCTCCGTTCCGTCAAACGCCA 204551
||| |||||||| |||||||| | ||| | | || | |||||| | ||| |||| ||
Sbjct 4411693 GTAGATGGTCTCGAAGATCTGGATGTTGAGT-TGTCTGGCCTCGGGAGAGTCGAACGGCA 4411635
Query 204552 GACCCAG 204558
||| |||
Sbjct 4411634 GACGCAG 4411628
>seq2
Length=5360957
Score = 123 bits (136), Expect = 4e-23
Identities = 285/426 (67%), Gaps = 9/426 (2%)
Strand=Plus/Minus
Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708
||| ||||| |||||||||||||| ||| ||| || || |||||||| |||| |||||
Sbjct 1779670 CTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGGACTCCATGAAGTCGAAGGGGTT 1779611
Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768
| ||| ||| |||| ||||| ||| |||||| | ||| || || || ||
Sbjct 1779610 GGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGGTCAGCGACGAACTC 1779551
Query 159769 GATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828
||||| |||||| ||| ||| || || ||||| | ||| || || || |
Sbjct 1779550 AATGTACTCGCACATCAGCTTGGCGTTCATGCCAAGCAGGCCGCAGGGAAGAGCGTCAGT 1779491
Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGAC-ACGTTCGTACC 159887
|| ||||||| ||| || |||| || ||| | || | | || || || | |
Sbjct 1779490 GAGGAACTCCTGCTCGATTCCGACAGCCTCGACAATGATATCCTCAACCACCTTGGGGTC 1779431
Query 159888 CCGGC--TTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945
||| | | || ||||| ||||| || || |||||||| ||| || ||
Sbjct 1779430 GGGGCGGTGGTTCA---TGTGGGAG---AACAGCAGACAAGCAAAGTCAGTGTGGAGACC 1779377
Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005
||| || || ||||| ||||||||||| | |||| || ||||| | |||||| ||
Sbjct 1779376 CTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACCAGGCATTAGGCCACGCTTCTT 1779317
Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065
||||| || |||| || || | ||| || ||||| |||||||| || || || ||
Sbjct 1779316 CAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATACCCTCCACAGCGGCGAAGGC 1779257
Query 160066 CACGAG 160071
|| ||
Sbjct 1779256 AACCAG 1779251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795155040968960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |