Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq3 138 3e-27
seq1 104 6e-17
>seq3
Length=5002383
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 199421 ACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCC 199480
|| ||||| ||||| |||||| |||| ||||||||| | | ||| | ||||| |||
Sbjct 15239 ACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCATCCTCC 15298
Query 199481 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGA 199540
|||||||| || |||||||| |||||||||||||| ||| ||| || || ||||||
Sbjct 15299 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGA 15358
Query 199541 ATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTA 199600
||||| ||| ||| |||| |||||||| | || || || | ||||| |||||
Sbjct 15359 ATCTTGCTCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACCTCTAGTGTGATAGTCTTT 15418
Query 199601 CCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || | ||| || ||||| |||||
Sbjct 15419 CCGGTCAAAGTCTTGACAAAGATTTG 15444
Score = 125 bits (138), Expect = 2e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|||||||||||||| || || ||||| |||| |||||| || | | || | |||||
Sbjct 15464 AGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCC 15523
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||||||||| ||||||||||| |||||||| || ||| || || ||
Sbjct 15524 TCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGAATGCCCTCCTTATCT 15583
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| |||||| |||| || || | || || || || | ||||| |||
Sbjct 15584 TGAATCTTGGACTTCACATTATCGATAGTATCGGATGACTCGACTTCAAGTGTGATAGTC 15643
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || || ||||| ||
Sbjct 15644 TTGCCGGTGAGTGTCTTGACGAAAATCTG 15672
Score = 113 bits (124), Expect = 1e-19
Identities = 139/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| || |||||||| |||||||| |||| ||| ||||| | || || | || ||
Sbjct 15978 AGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGACAGTGTGCGACCGTCC 16037
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||||||||| ||||| | ||||||||||||||| ||| || || |||
Sbjct 16038 TCGAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 16097
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| |||||| ||| || |||| ||| || | | || || || | ||||| |||
Sbjct 16098 TGGATCTTTGACTTGACATTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTC 16157
Query 199598 TTACCCGTGA 199607
|| || ||||
Sbjct 16158 TTGCCAGTGA 16167
Score = 109 bits (120), Expect = 1e-18
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | ||| ||||| ||||| || |||| ||| ||||||| || || | || ||
Sbjct 15692 AGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGACAGGGTACGACCGTCC 15751
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||| ||||| | |||||||||||| || ||| || || |||
Sbjct 15752 TCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 15811
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| |||||| ||||||| |||| ||| || | | || || || | || || |||
Sbjct 15812 TGGATCTTTGACTTCACGTTGTCGATGGTATCGCTAGACTCAACCTCAAGGGTAATGGTC 15871
Query 199598 TTACCCGTGAGAGTTTTCAC 199617
|| || || || || || ||
Sbjct 15872 TTTCCGGTCAGGGTCTTGAC 15891
>seq1
Length=8587311
Score = 104 bits (114), Expect = 6e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
|||| |||| ||||||||| || || | ||||| || |||||||| ||||||||||
Sbjct 959570 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 959511
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| |||||||| ||||| || ||| || || ||||| ||||| ||| ||| |
Sbjct 959510 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 959451
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||| |||||| | | || ||||| | || || ||||||||||| || || || || |
Sbjct 959450 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 959391
Query 199620 AA 199621
||
Sbjct 959390 AA 959389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921358321072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |