Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2 181 1e-40 seq1 127 2e-24 seq3 95.1 1e-14 >seq2 Length=5360957 Score = 181 bits (200), Expect = 1e-40 Identities = 206/276 (75%), Gaps = 3/276 (1%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||| |||||||| || || |||| ||||| | ||||||||| ||| || || Sbjct 1779071 GTAGGTATCGATGAGCAGAGAGTAGGTTTCAGAGTGGATGTTCTCCATCATGATCTGGAA 1779012 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 |||||| ||||| || |||||| | ||| || ||| | ||| ||||| || || || Sbjct 1779011 GCCGTAGAAGCAACGGGCCTCGGGGATCTGAACCTCTCCACTGAAGCGCTCAACAAGGTT 1778952 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 |||||||| || |||||| ||||||||| ||||| || ||||| || ||| | || Sbjct 1778951 CTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGAGACGAAGTAACG 1778892 Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 ||| | |||||||||||| | ||||||| | |||||||| || || | |||||| Sbjct 1778891 CTCATCGTCGTTCAAGCGGTTGTGCCAGTCGTGAAGATCCTTGGAAAGATCGATCTCCTC 1778832 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||||||| || || |||||||| || |||||||| Sbjct 1778831 GGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACAT 1778796 Score = 145 bits (160), Expect = 8e-30 Identities = 327/482 (68%), Gaps = 12/482 (2%) Strand=Plus/Minus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 || || || || || || || || ||||||| ||| | ||| || || ||||||||| Sbjct 1779669 TTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGGACTCCATGAAGTCGAAGGGGTTG 1779610 Query 132685 GCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | |||||||| ||| | |||||| || | || ||||| | ||| || |||||| Sbjct 1779609 GTAGCGTTGTAGTACTTCTTGTTGCCGA---GGGCCACCAGCAGGCGGTCAGCGACGAAC 1779553 Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGAC-GCACCGGCAGCGCTT 132799 || ||||| | |||| | || || | | | || ||||| | ||| || || || | Sbjct 1779552 TCAATGTACTCGCACATCAGCTTGGCGTTCATG-CCAAGCAGGCCGCAG-GGAAGAGCGT 1779495 Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859 | ||||| || |||||||| |||| || ||| | ||| ||| ||| | | | Sbjct 1779494 CAGTGAGGAACTCCTGCTCGATTCCGACAGCCTCGACAATGATATCCTCAAC-CACCTTG 1779436 Query 132860 CGCTCGGC-CGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCC 132918 | |||| || || || || ||||| || ||||||||||| || | ||| Sbjct 1779435 GGGTCGGGGCGGTGGTTCATGTGGGAGAACAGCAGACAAGCAAAGTCAGTGTGGAGACCC 1779376 Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978 || || | ||| || | |||||| |||||| | || ||||| ||||| || || || Sbjct 1779375 TCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACCAGGCATTAGGCCACGCTTCTTC 1779316 Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038 ||||| || |||| |||||| ||| || ||||||| ||||| || || ||||| || Sbjct 1779315 AGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATACCCTCCACAGCGGCGAAGGCA 1779256 Query 133039 ACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098 ||||| ||| |||| || | || | | ||||||||| || ||||| | |||| Sbjct 1779255 ACCAGACGCGAAGCGAAGGTTGACTCACGGTCGTTGATCCAGCGGAGGGCCCAGTTGGCC 1779196 Query 133099 TT 133100 || Sbjct 1779195 TT 1779194 >seq1 Length=8587311 Score = 127 bits (140), Expect = 2e-24 Identities = 142/186 (76%), Gaps = 4/186 (2%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || ||||| || ||||| ||| |||| |||||| | | ||||| | | Sbjct 959390 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 959449 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | |||| | |||| || |||| ||||| ||||| |||||| | ||||||||||| | Sbjct 959450 GACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTC 959507 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| ||||| ||||| || || | |||||||| | ||||||||||||||| | Sbjct 959508 TGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGA 959567 Query 38431 AGGAAG 38436 ||| || Sbjct 959568 AGGTAG 959573 >seq3 Length=5002383 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || | || || || || ||||| | || || ||| | | Sbjct 15447 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACTATCACACTAGAGGTGGAGAGCTCA 15388 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| || || | ||||| ||||| ||||| | |||| Sbjct 15387 GACACCATCGACAACG--TCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACC 15330 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| || || |||||||| || | || || || ||||||| Sbjct 15329 AGCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCGGACTACA 15270 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||||| ||||| ||| || ||||| ||||| ||||| || | || |||| Sbjct 15269 ACATCCAGAAGGAGAGC-ACTCTGCACCTGGTGTTGCGTCTGCGTGGTGGCC 15219 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| || ||||| | || |||||| | || Sbjct 15675 ATGCAGATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTCGAGTCATCC 15616 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | || || || | || || ||||| |||||| | ||||| Sbjct 15615 GATACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 15556 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||| | || || || ||||| || || | ||||| || ||| |||||| Sbjct 15555 CAACGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGCACACTTTCCGATTACAAC 15496 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| |||||| | || || || | || || ||| Sbjct 15495 ATCCAGAAGGAATCCACACTCCACCTTGTCCTCCGT 15460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172699965440