Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq2 181 1e-40
seq1 127 2e-24
seq3 95.1 1e-14
>seq2
Length=5360957
Score = 181 bits (200), Expect = 1e-40
Identities = 206/276 (75%), Gaps = 3/276 (1%)
Strand=Plus/Minus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
|||||| |||||||| || || |||| ||||| | ||||||||| ||| || ||
Sbjct 1779071 GTAGGTATCGATGAGCAGAGAGTAGGTTTCAGAGTGGATGTTCTCCATCATGATCTGGAA 1779012
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286
|||||| ||||| || |||||| | ||| || ||| | ||| ||||| || || ||
Sbjct 1779011 GCCGTAGAAGCAACGGGCCTCGGGGATCTGAACCTCTCCACTGAAGCGCTCAACAAGGTT 1778952
Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346
|||||||| || |||||| ||||||||| ||||| || ||||| || ||| | ||
Sbjct 1778951 CTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGAGACGAAGTAACG 1778892
Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403
||| | |||||||||||| | ||||||| | |||||||| || || | ||||||
Sbjct 1778891 CTCATCGTCGTTCAAGCGGTTGTGCCAGTCGTGAAGATCCTTGGAAAGATCGATCTCCTC 1778832
Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| ||||||| || || |||||||| || ||||||||
Sbjct 1778831 GGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACAT 1778796
Score = 145 bits (160), Expect = 8e-30
Identities = 327/482 (68%), Gaps = 12/482 (2%)
Strand=Plus/Minus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684
|| || || || || || || || ||||||| ||| | ||| || || |||||||||
Sbjct 1779669 TTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGGACTCCATGAAGTCGAAGGGGTTG 1779610
Query 132685 GCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741
| | |||||||| ||| | |||||| || | || ||||| | ||| || ||||||
Sbjct 1779609 GTAGCGTTGTAGTACTTCTTGTTGCCGA---GGGCCACCAGCAGGCGGTCAGCGACGAAC 1779553
Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGAC-GCACCGGCAGCGCTT 132799
|| ||||| | |||| | || || | | | || ||||| | ||| || || || |
Sbjct 1779552 TCAATGTACTCGCACATCAGCTTGGCGTTCATG-CCAAGCAGGCCGCAG-GGAAGAGCGT 1779495
Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859
| ||||| || |||||||| |||| || ||| | ||| ||| ||| | | |
Sbjct 1779494 CAGTGAGGAACTCCTGCTCGATTCCGACAGCCTCGACAATGATATCCTCAAC-CACCTTG 1779436
Query 132860 CGCTCGGC-CGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCC 132918
| |||| || || || || ||||| || ||||||||||| || | |||
Sbjct 1779435 GGGTCGGGGCGGTGGTTCATGTGGGAGAACAGCAGACAAGCAAAGTCAGTGTGGAGACCC 1779376
Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978
|| || | ||| || | |||||| |||||| | || ||||| ||||| || || ||
Sbjct 1779375 TCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACCAGGCATTAGGCCACGCTTCTTC 1779316
Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038
||||| || |||| |||||| ||| || ||||||| ||||| || || ||||| ||
Sbjct 1779315 AGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATACCCTCCACAGCGGCGAAGGCA 1779256
Query 133039 ACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098
||||| ||| |||| || | || | | ||||||||| || ||||| | ||||
Sbjct 1779255 ACCAGACGCGAAGCGAAGGTTGACTCACGGTCGTTGATCCAGCGGAGGGCCCAGTTGGCC 1779196
Query 133099 TT 133100
||
Sbjct 1779195 TT 1779194
>seq1
Length=8587311
Score = 127 bits (140), Expect = 2e-24
Identities = 142/186 (76%), Gaps = 4/186 (2%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || ||||| || ||||| ||| |||| |||||| | | ||||| | |
Sbjct 959390 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 959449
Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370
| |||| | |||| || |||| ||||| ||||| |||||| | ||||||||||| |
Sbjct 959450 GACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTC 959507
Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430
| || | ||| ||||| ||||| || || | |||||||| | ||||||||||||||| |
Sbjct 959508 TGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGA 959567
Query 38431 AGGAAG 38436
||| ||
Sbjct 959568 AGGTAG 959573
>seq3
Length=5002383
Score = 95.1 bits (104), Expect = 1e-14
Identities = 164/232 (71%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || | || || || || ||||| | || || ||| | |
Sbjct 15447 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACTATCACACTAGAGGTGGAGAGCTCA 15388
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | | |||| | |||| || || | ||||| ||||| ||||| | ||||
Sbjct 15387 GACACCATCGACAACG--TCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACC 15330
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| || || | ||| || || |||||||| || | || || || |||||||
Sbjct 15329 AGCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCGGACTACA 15270
Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
||||||| ||||| ||| || ||||| ||||| ||||| || | || ||||
Sbjct 15269 ACATCCAGAAGGAGAGC-ACTCTGCACCTGGTGTTGCGTCTGCGTGGTGGCC 15219
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| || ||||| | || |||||| | ||
Sbjct 15675 ATGCAGATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTCGAGTCATCC 15616
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | || || || | || || ||||| |||||| | |||||
Sbjct 15615 GATACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 15556
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || ||||| | || || || ||||| || || | ||||| || ||| ||||||
Sbjct 15555 CAACGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGCACACTTTCCGATTACAAC 15496
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||| |||||| | || || || | || || |||
Sbjct 15495 ATCCAGAAGGAATCCACACTCCACCTTGTCCTCCGT 15460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172699965440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |