Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq1 183 4e-41
seq3 120 4e-22
seq2 109 7e-19
>seq1
Length=8587311
Score = 183 bits (202), Expect = 4e-41
Identities = 386/566 (68%), Gaps = 21/566 (4%)
Strand=Plus/Plus
Query 111924 GGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGG 111983
|||||| |||| ||||| || || |||||| ||| || || ||||| |||| | |||
Sbjct 4410893 GGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCACGTTATGTGGACCAGGGTGG- 4410951
Query 111984 CGTCGCAAG------GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATG 112037
| |||| || | | || |||| || ||||| |||||||| ||| || |
Sbjct 4410952 --TAACAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTC 4411009
Query 112038 GAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGCGGTGCCGCGATCTCT 112095
|||||||| || |||| || || ||| | ||||||| |||| | || || || |
Sbjct 4411010 GAGTTCCTCGATCTGCGCAAGAATCACGGTAAGGAGGAGGTTCGCGCT--CGTGACCTTT 4411067
Query 112096 TCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGT 112155
||| |||||| |||| || ||||||||||||||| | || |||| | || | |||
Sbjct 4411068 TCTACGCTCTGTGGACCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAACGGTGACTGGA 4411127
Query 112156 CTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAG 112215
| ||||| || || | |||| || || || | |||| | ||||| ||||| || |
Sbjct 4411128 CGCTCTTCTGCCCCAATGAGGCCCCTGGCCTAGCTGATGTCTACGGTGATGAGTTCGAGG 4411187
Query 112216 CCCTCTACACAAAGTACGAGGAAGAAAGTCG-GGCGACTGCGACGGTGCCAGCTGCCGAT 112274
| |||||| | ||||||||| | || | || ||| | ||| | | || | ||
Sbjct 4411188 CTCTCTACGCCAAGTACGAGCAGGAGGGCCGTGGCCGC-AAGACCAT-CAAGGCTCAGAA 4411245
Query 112275 G-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAA 112333
| | ||| | || |||||| || | || || |||||||||| || | ||||| |||||
Sbjct 4411246 GCTCTGGTACGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCCCTTCATGCTCTACAA 4411305
Query 112334 AGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCT 112393
|| || || ||| | |||||||| || ||||| ||||| || || || |||||
Sbjct 4411306 GGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCGCAGCTCTAACCT 4411365
Query 112394 CTGTACAGAAATCTTGGAATTTACAG--ACAAAGATGAGACGGCTGTGTGTAACCTCGCA 112451
|| || || || | || ||||| | |||||| |||||| || ||||| ||
Sbjct 4411366 GTGCACTGAGATTATCGA--GTACAGTACCCCTGATGAGGTGGCTGTTTGCAACCTGGCT 4411423
Query 112452 TCAATCGCTCTCCCCAAGTATGTGGA 112477
|| |||| ||||||| ||||| ||
Sbjct 4411424 TCTCTCGCCCTCCCCACCTATGTCGA 4411449
>seq3
Length=5002383
Score = 120 bits (132), Expect = 4e-22
Identities = 285/424 (67%), Gaps = 25/424 (6%)
Strand=Plus/Minus
Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944
|| ||||| || || || || | ||| || | ||||| | ||| ||||| || |
Sbjct 3509536 CGGTCAAATCGTCCGGGACGCATGAGTGCCTTGTCAAGAACATCCGGTCGATTGGTACCA 3509477
Query 15945 GCGATGACAACAATACCTGTTTCGT--TATCAAAACCATCCATCTCTGTCAAAAGCTGGT 16002
|| | |||||| | | || | | ||| |||||||||||||| || | || |||||
Sbjct 3509476 GCCAAGACAACCA--CTTGCTCAGAGGTATTGAAACCATCCATCTCAGTGAGAATCTGGT 3509419
Query 16003 TAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTG--CGTTGCT---- 16056
| | ||| ||| |||||||| || | ||||||| | | | |||||
Sbjct 3509418 TGAGAGTGCTTTCACGTTCATCGTTTCC------ACCACCAACGTTCGACTTTGCTCGAG 3509365
Query 16057 ---TTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGA 16113
|||| | |||||||| ||||||||||||| |||||| || ||| | || |||
Sbjct 3509364 ACTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCGG 3509305
Query 16114 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 16173
| | |||||||| || ||||| || || ||||| |||||||| || ||||| | |
Sbjct 3509304 TTGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCGG 3509245
Query 16174 --CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAG 16231
| | | ||| || | ||| || || |||||||| ||| |||| || || |
Sbjct 3509244 AACCACTG-ACACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCAA 3509187
Query 16232 AGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--A 16289
|||||||| ||||| || ||| | ||| | |||||| || |||||||| || || |
Sbjct 3509186 TGTCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCAA 3509127
Query 16290 CTTC 16293
||||
Sbjct 3509126 CTTC 3509123
>seq2
Length=5360957
Score = 109 bits (120), Expect = 7e-19
Identities = 120/160 (75%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231
|||| ||| ||| || | || || || ||| ||||||||||||||||| || || |
Sbjct 1779237 CCTTCGCTTCGCGTCTGGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCCGGCTCAT 1779296
Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291
|| | | || | ||||| |||||||| || || ||||| |||||| ||||||||||
Sbjct 1779297 TCGCCTCCATCTTCTGGCTGAAGAAGCGTGGCCTAATGCCTGGTCTCACTTTCTCCAACG 1779356
Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
|| | ||||| ||||| ||||| |||||| || |||||
Sbjct 1779357 AGTTGATCTCCCGTGATGAGGGTCTCCACACTGACTTTGC 1779396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742275851520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |