Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1 183 4e-41 seq3 120 4e-22 seq2 109 7e-19 >seq1 Length=8587311 Score = 183 bits (202), Expect = 4e-41 Identities = 386/566 (68%), Gaps = 21/566 (4%) Strand=Plus/Plus Query 111924 GGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGG 111983 |||||| |||| ||||| || || |||||| ||| || || ||||| |||| | ||| Sbjct 4410893 GGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCACGTTATGTGGACCAGGGTGG- 4410951 Query 111984 CGTCGCAAG------GGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATG 112037 | |||| || | | || |||| || ||||| |||||||| ||| || | Sbjct 4410952 --TAACAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTC 4411009 Query 112038 GAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGCGGTGCCGCGATCTCT 112095 |||||||| || |||| || || ||| | ||||||| |||| | || || || | Sbjct 4411010 GAGTTCCTCGATCTGCGCAAGAATCACGGTAAGGAGGAGGTTCGCGCT--CGTGACCTTT 4411067 Query 112096 TCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGT 112155 ||| |||||| |||| || ||||||||||||||| | || |||| | || | ||| Sbjct 4411068 TCTACGCTCTGTGGACCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAACGGTGACTGGA 4411127 Query 112156 CTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAG 112215 | ||||| || || | |||| || || || | |||| | ||||| ||||| || | Sbjct 4411128 CGCTCTTCTGCCCCAATGAGGCCCCTGGCCTAGCTGATGTCTACGGTGATGAGTTCGAGG 4411187 Query 112216 CCCTCTACACAAAGTACGAGGAAGAAAGTCG-GGCGACTGCGACGGTGCCAGCTGCCGAT 112274 | |||||| | ||||||||| | || | || ||| | ||| | | || | || Sbjct 4411188 CTCTCTACGCCAAGTACGAGCAGGAGGGCCGTGGCCGC-AAGACCAT-CAAGGCTCAGAA 4411245 Query 112275 G-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAA 112333 | | ||| | || |||||| || | || || |||||||||| || | ||||| ||||| Sbjct 4411246 GCTCTGGTACGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCCCTTCATGCTCTACAA 4411305 Query 112334 AGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCT 112393 || || || ||| | |||||||| || ||||| ||||| || || || ||||| Sbjct 4411306 GGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCGCAGCTCTAACCT 4411365 Query 112394 CTGTACAGAAATCTTGGAATTTACAG--ACAAAGATGAGACGGCTGTGTGTAACCTCGCA 112451 || || || || | || ||||| | |||||| |||||| || ||||| || Sbjct 4411366 GTGCACTGAGATTATCGA--GTACAGTACCCCTGATGAGGTGGCTGTTTGCAACCTGGCT 4411423 Query 112452 TCAATCGCTCTCCCCAAGTATGTGGA 112477 || |||| ||||||| ||||| || Sbjct 4411424 TCTCTCGCCCTCCCCACCTATGTCGA 4411449 >seq3 Length=5002383 Score = 120 bits (132), Expect = 4e-22 Identities = 285/424 (67%), Gaps = 25/424 (6%) Strand=Plus/Minus Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944 || ||||| || || || || | ||| || | ||||| | ||| ||||| || | Sbjct 3509536 CGGTCAAATCGTCCGGGACGCATGAGTGCCTTGTCAAGAACATCCGGTCGATTGGTACCA 3509477 Query 15945 GCGATGACAACAATACCTGTTTCGT--TATCAAAACCATCCATCTCTGTCAAAAGCTGGT 16002 || | |||||| | | || | | ||| |||||||||||||| || | || ||||| Sbjct 3509476 GCCAAGACAACCA--CTTGCTCAGAGGTATTGAAACCATCCATCTCAGTGAGAATCTGGT 3509419 Query 16003 TAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTG--CGTTGCT---- 16056 | | ||| ||| |||||||| || | ||||||| | | | ||||| Sbjct 3509418 TGAGAGTGCTTTCACGTTCATCGTTTCC------ACCACCAACGTTCGACTTTGCTCGAG 3509365 Query 16057 ---TTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGA 16113 |||| | |||||||| ||||||||||||| |||||| || ||| | || ||| Sbjct 3509364 ACTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCGG 3509305 Query 16114 CTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 16173 | | |||||||| || ||||| || || ||||| |||||||| || ||||| | | Sbjct 3509304 TTGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCGG 3509245 Query 16174 --CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAG 16231 | | | ||| || | ||| || || |||||||| ||| |||| || || | Sbjct 3509244 AACCACTG-ACACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCAA 3509187 Query 16232 AGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--A 16289 |||||||| ||||| || ||| | ||| | |||||| || |||||||| || || | Sbjct 3509186 TGTCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCAA 3509127 Query 16290 CTTC 16293 |||| Sbjct 3509126 CTTC 3509123 >seq2 Length=5360957 Score = 109 bits (120), Expect = 7e-19 Identities = 120/160 (75%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 |||| ||| ||| || | || || || ||| ||||||||||||||||| || || | Sbjct 1779237 CCTTCGCTTCGCGTCTGGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCCGGCTCAT 1779296 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 || | | || | ||||| |||||||| || || ||||| |||||| |||||||||| Sbjct 1779297 TCGCCTCCATCTTCTGGCTGAAGAAGCGTGGCCTAATGCCTGGTCTCACTTTCTCCAACG 1779356 Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 || | ||||| ||||| ||||| |||||| || ||||| Sbjct 1779357 AGTTGATCTCCCGTGATGAGGGTCTCCACACTGACTTTGC 1779396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742275851520