Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq1 208 9e-49
>seq1
Length=8587311
Score = 208 bits (230), Expect = 9e-49
Identities = 541/815 (66%), Gaps = 25/815 (3%)
Strand=Plus/Minus
Query 110271 GACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGT 110330
|||||| ||||||| || | ||| || || ||||| |||| ||| || | |
Sbjct 4411447 GACATAGGTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACT 4411388
Query 110331 GTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATT 110390
||| || | ||| || || |||| ||| || || ||| ||||| ||||||||| ||
Sbjct 4411387 GTACTCGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTT 4411328
Query 110391 CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGA 110450
|| |||||| |||||||| ||||||||| | ||| ||||||| || ||||| |
Sbjct 4411327 ACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGC 4411268
Query 110451 CTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGT--TGCGTTAGCGA-GACCTT 110506
|| ||||||||| | ||| | | || | | | | | || |||| || | | || |
Sbjct 4411267 CTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG-ATGGTCTTGCG---GCCACGGCCCT 4411212
Query 110507 CCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCT 110566
||| ||||||||||| ||| | |||| || || | ||||| ||||||| || ||
Sbjct 4411211 CCTGCTCGTACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAG 4411152
Query 110567 TCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCT---CCTCAACCCTCTTCATGA 110623
|||| | ||| |||||||| | ||| | |||| | |||| || | ||||||||
Sbjct 4411151 GGGCCTCATTGGGGCAGAAGAGCGTCCAGT---CACCGTTGGCCTCGACGCGCTTCATGA 4411095
Query 110624 ACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTT 110683
| || || || |||||| || ||||||||||||| ||| |||| || | ||| |
Sbjct 4411094 AGAGATCGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACCGT 4411035
Query 110684 GGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAG 110743
| || ||| || || | || || | || ||| | |||||| || || || |||| |
Sbjct 4411034 GATTCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGG 4410975
Query 110744 CGATGGATCC------CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGA 110797
| | || || ||| || || |||||| ||||| ||||| ||| || |
Sbjct 4410974 CAAAGGCACCGGGGCGCTTGTTACCAC---CCTGGTCCACATAACGTGCGGTGTTGTTAA 4410918
Query 110798 AGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACT 110857
| || | |||||||||| ||| || | ||| || || || || ||| ||
Sbjct 4410917 ACACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAAC 4410858
Query 110858 TATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTG 110917
| || |||||| ||||| || | ||| |||||||| || ||| || |
Sbjct 4410857 CGGTAGCGCGAATGCGGTGGACATTGAGACCGATACCACCAGCGGTCTTGGAGATCATGG 4410798
Query 110918 CACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGA 110976
|||| ||| |||| ||| |||||||||| ||||| ||||| | | ||| ||
Sbjct 4410797 CACAGGTCT-TGAGAGTATCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGG 4410739
Query 110977 AAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGA 111036
|||||||| | | ||| || | || || | |||||||| || || || | || |||
Sbjct 4410738 AAGCAAGATGCGAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGA 4410679
Query 111037 ATGAACAGACCTTGGGACATCTTGTTGTATGTGTC 111071
|||| |||||||||| || |||||| ||
Sbjct 4410678 GTGAAGTACTTTTGGGACATCAAGTGGTATGTCTC 4410644
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975882204800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |