Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1 239 5e-58
seq3 118 1e-21
seq2 109 6e-19
>seq1
Length=8587311
Score = 239 bits (264), Expect = 5e-58
Identities = 578/868 (67%), Gaps = 19/868 (2%)
Strand=Plus/Minus
Query 106447 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 106506
|||||| | || ||||||| || |||| |||||||||||| |||||| |
Sbjct 4411447 GACATAGGTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACT 4411388
Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566
|||||| | ||| || || |||| ||| || || ||| || |||| ||||| |||||
Sbjct 4411387 GTACTCGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTT 4411328
Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626
|||||| |||||||| |||||||||||||||||| |||| | || ||||| ||||| |
Sbjct 4411327 ACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGC 4411268
Query 106627 CTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCT 106682
|| |||||| || | ||| | | || | | || | |||| || |||| || ||||
Sbjct 4411267 CTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG----ATGGTCTTGCGGCCACGGCCCT 4411212
Query 106683 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 106742
|| ||||||||| | |||||| || || ||||| ||||| | || | || || |
Sbjct 4411211 CCTGCTCGTACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAG 4411152
Query 106743 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAA 106802
| |||| | || ||||| || | ||| | ||| |||| || ||||||||||| |
Sbjct 4411151 GGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGA 4411092
Query 106803 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGT 106862
| || || ||||||| | | || || || | | ||| |||| || | ||| || |
Sbjct 4411091 GATCGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACCGTGAT 4411032
Query 106863 TGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 106922
| || | || |||||||| | || ||| |||||||| ||||| || |||| || |
Sbjct 4411031 TCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAA 4410972
Query 106923 TAGATCC------CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATA 106976
| || ||| | ||| | || | ||||| || || ||| |||||| |
Sbjct 4410971 AGGCACCGGGGCGCTTGTTA---CCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACA 4410915
Query 106977 CGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTAT 107036
| || ||||| |||| |||||| | || || || || || ||| |||
Sbjct 4410914 CACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGG 4410855
Query 107037 TGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCAC 107096
| || | | |||| | | || ||||| ||||| ||| ||||| ||||
Sbjct 4410854 TAGCGCGAATGCGGTGGACATTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCAC 4410795
Query 107097 ACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGC 107156
| | | ||||| |||| ||||| | || ||| | | | | | |||||||
Sbjct 4410794 AGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGC 4410735
Query 107157 AACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGA 107216
|| | | ||| ||| || ||| | |||||||| || || || | |||||| |||
Sbjct 4410734 AAGATGCGAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGA 4410675
Query 107217 ACATAC-CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGG 107275
| ||| |||||||||| || ||||||||| | | | |||||||| || |||||
Sbjct 4410674 A-GTACTTTTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGA 4410616
Query 107276 ATGCCGATGGCCACACGCATAAACATGT 107303
|| |||| || |||||||| | || ||
Sbjct 4410615 ATTCCGACAGCAACACGCATCAGCAAGT 4410588
>seq3
Length=5002383
Score = 118 bits (130), Expect = 1e-21
Identities = 302/453 (67%), Gaps = 29/453 (6%)
Strand=Plus/Minus
Query 9192 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9251
|| ||||| || || ||||| | ||| || | ||||| | ||| ||||| || |
Sbjct 3509536 CGGTCAAATCGTCCGGGACGCATGAGTGCCTTGTCAAGAACATCCGGTCGATTGGTACCA 3509477
Query 9252 GCGATGACAACAATACCTGTTTCAT---TATCAAAACCATCCATCTCTGTCAAAAGTTGG 9308
|| | |||||| | || ||| ||| |||||||||||||| || | || |||
Sbjct 3509476 GCCAAGACAACCA---CTTGCTCAGAGGTATTGAAACCATCCATCTCAGTGAGAATCTGG 3509420
Query 9309 TTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTG--CGTTGCT--- 9363
|| | ||| ||| |||||||| || | ||||||| | | | |||||
Sbjct 3509419 TTGAGAGTGCTTTCACGTTCATCGTTTCC------ACCACCAACGTTCGACTTTGCTCGA 3509366
Query 9364 ----TTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCG 9419
|||| | |||||||| ||||||||||||| || || || ||| | ||||||
Sbjct 3509365 GACTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCG 3509306
Query 9420 ATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTT 9479
|| | ||||||||||| || | || || ||||| |||||||| || ||||| |
Sbjct 3509305 GTTGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCG 3509246
Query 9480 G--CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 9537
| | | | ||| || | ||| || || |||||||| ||| |||| || || |
Sbjct 3509245 GAACCACTG-ACACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCA 3509188
Query 9538 GAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC-- 9595
|||||||| ||||| || ||| | ||| | |||||| || |||||||| || ||
Sbjct 3509187 ATGTCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCA 3509128
Query 9596 ACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAA 9628
||||| | | | ||| ||||||| ||| ||
Sbjct 3509127 ACTTC--TCGAACCGCTCGGGTTGCTGGAGGAA 3509097
>seq2
Length=5360957
Score = 109 bits (120), Expect = 6e-19
Identities = 120/160 (75%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333
||||| || ||||||||||||||| ||||| || | || || ||||| || ||
Sbjct 1779396 GCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACCA 1779337
Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393
||||| || || |||||||||| ||| | || | | |||||| |||||||||||||||
Sbjct 1779336 GGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATA 1779277
Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433
||||||||| || || |||| || ||| |||||||
Sbjct 1779276 CCCTCCACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGG 1779237
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980682003840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |