Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq3 172 1e-37
seq1 113 1e-19
seq2 107 4e-18
>seq3
Length=5002383
Score = 172 bits (190), Expect = 1e-37
Identities = 166/213 (78%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
||| || ||||| |||||| ||| || || || ||||| || | |||||| | |||||
Sbjct 15235 CAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCATC 15294
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
|| ||||||||||| ||||||||||| || || ||||| |||||||| || || |||||
Sbjct 15295 CTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTC 15354
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
||||| || ||||||||| || |||||||| || || ||||| || || || | ||
Sbjct 15355 CTGAATCTTGCTCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACCTCTAGTGTGATAGT 15414
Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|||||| |||||||| || || || | ||||||
Sbjct 15415 CTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 15447
Score = 116 bits (128), Expect = 8e-21
Identities = 142/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| |||||||||||||| || || || || || | || || | || || || |||||
Sbjct 15700 GTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGACAGGGTACGACCGTCCTCCAGCTG 15759
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || ||||| | || || ||||| || |||||||| || ||||| || || ||
Sbjct 15760 CTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTT 15819
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
| ||| ||||| || ||||| || | || || |||||||||| |||||||| ||
Sbjct 15820 TGACTTCACGTTGTCGATGGTATCGCTAGACTCAACCTCAAGGGTAATGGTCTTTCCGGT 15879
Query 195117 CAAAGTTTTTACGA 195130
|| || || ||||
Sbjct 15880 CAGGGTCTTGACGA 15893
Score = 102 bits (112), Expect = 2e-16
Identities = 136/187 (73%), Gaps = 4/187 (2%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || ||||||||||| || || || || || |||| || || | || || |||
Sbjct 15981 ACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGACAGTGTGCGACCGTCCTCG 16040
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| | || || ||||| || |||||||| || ||||| ||
Sbjct 16041 AGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 16100
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCT 195109
|| ||| |||||| || || ||||| | | | || || || |||||||| | ||||
Sbjct 16101 ATCTTTGACTTGACATTGTCGATGGTATCGCTGGAC--TCAACCTCAAGGGTGATGGTCT 16158
Query 195110 TTCCTGT 195116
| || ||
Sbjct 16159 TGCCAGT 16165
>seq1
Length=8587311
Score = 113 bits (124), Expect = 1e-19
Identities = 135/182 (74%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| || || ||||| ||| || || | ||||| ||||||||||| || ||||||||
Sbjct 959568 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 959509
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
|| || |||||||| || |||||||| || ||||| || || || ||||||||| ||
Sbjct 959508 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 959449
Query 195073 ATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129
|||||||| ||| || || || ||||||| ||||| || |||| || || |||
Sbjct 959448 ATGGTGTCGCTCGA---CTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 959392
Query 195130 AA 195131
||
Sbjct 959391 AA 959390
Score = 109 bits (120), Expect = 1e-18
Identities = 189/275 (69%), Gaps = 0/275 (0%)
Strand=Plus/Plus
Query 160587 TTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATT 160646
|||||||||| | ||||| ||||||| ||||||||| | || | | ||| || || |
Sbjct 4411065 TTTTCTACGCTCTGTGGACCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAACGGTGACT 4411124
Query 160647 GGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCG 160706
||| || ||||| |||||||| || ||||| || | |||||| || ||| |||||||
Sbjct 4411125 GGACGCTCTTCTGCCCCAATGAGGCCCCTGGCCTAGCTGATGTCTACGGTGATGAGTTCG 4411184
Query 160707 AGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAG 160766
|| |||| || | | ||||| | ||||| | | | ||| | | ||||| ||
Sbjct 4411185 AGGCTCTCTACGCCAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACCATCAAGGCTCAGA 4411244
Query 160767 AACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACA 160826
| || ||| | ||| || | ||||| ||| |||| ||||| || ||||
Sbjct 4411245 AGCTCTGGTACGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCCCTTCATGCTCTACA 4411304
Query 160827 AGGATGCCATCTGTCGCAAGAGTAACCAGAAGAAC 160861
||||||| | ||||||||||||||||||
Sbjct 4411305 AGGATGCTTGCAACAAGAAGAGTAACCAGAAGAAC 4411339
>seq2
Length=5360957
Score = 107 bits (118), Expect = 4e-18
Identities = 94/117 (80%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| |||||||| || ||||| || || || |||||||| | |||||| | || || |||
Sbjct 1552183 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCCTCG 1552124
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
||||||||||| |||||||| | ||||||||||| || ||||| || || ||||||
Sbjct 1552123 AGCTGCTTACCAGCGAAGATCAAACGTTGTTGGTCAGGGGGAATACCCTCCTTGTCT 1552067
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481372556272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |