Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq3 96.9 3e-14
>seq3
Length=5002383
Score = 96.9 bits (106), Expect = 3e-14
Identities = 155/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
|||||||| ||||| || || || ||| || || |||||||| | || || |
Sbjct 15458 AGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGA 15517
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
||| ||||| || ||||||||||| || || | |||||| ||||| ||||| || ||
Sbjct 15518 CCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGAATGCCCTCC 15577
Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435
||||||||||| || || || || || ||||| | ||| | | ||| || ||
Sbjct 15578 TTATCTTGAATCTTGGACTTCACATTATCGATAGTATC-GGATGACTCGACTTCAAGTGT 15636
Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
| ||| || || || || || || |||||||| ||||||
Sbjct 15637 GATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCATA 15676
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029295153847840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |