Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1 223 4e-53 seq2 109 7e-19 seq3 105 8e-18 >seq1 Length=8587311 Score = 223 bits (246), Expect = 4e-53 Identities = 577/872 (66%), Gaps = 13/872 (1%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| || || | ||||| || || |||| || ||||| || |||||||| | | Sbjct 4410581 CCTCAGCACTTGCTGATGCGTGTTGCTGTCGGAATTCACGGCGAGGACATTGAGAAGGCC 4410640 Query 75272 TTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||||||| || |||||||||| ||| |||| |||||| | || || || || Sbjct 4410641 ATTGAGACATACCACTTGATGTCCCAAAAGTAC-TTCACTCACGCCTCCCCCACTCTGTT 4410699 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 |||||| | ||| || ||| ||| | | ||||||||| | | | | | || Sbjct 4410700 CAATGCCGCTACTCCCCAACCCCAGCTCGCATCTTGCTTCCTGGTTGACGTGAGCGCAGA 4410759 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | || | ||||| |||| ||||| | | ||||| ||||| ||| ||||| Sbjct 4410760 CAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGACCGCTGG 4410819 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 ||||| || | | |||| | | || | ||| ||| || || || Sbjct 4410820 TGGTATCGGTCTCAATGTCCACCGCATTCGCGCTACCGGTTCTTACATTGCTGGAACCAA 4410879 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 || || | |||||| |||| ||||| || || |||||| ||| || || ||||| Sbjct 4410880 CGGCTCCTCCAACGGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCACGTTATGT 4410939 Query 75571 AAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGGCA 75624 | || ||| || |||| | || || | || ||||| |||| || ||||| Sbjct 4410940 GGACCA---GGGTGGTAACAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGGCA 4410996 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 |||||| || | |||||||| || | || || || ||| | || |||| ||| Sbjct 4410997 CGCCGATGTCTTCGAGTTCCTCGATCTGCGCAAGAATCACGGTAAGGAGGAGGTTCGCGC 4411056 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 | | || || || | | ||||||| || || || ||||||||||| || |||| Sbjct 4411057 TCGTGACCTTTTCTACGCTCTGTGGACCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAA 4411116 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804 ||| | ||| | || ||||| || | |||| || || || | || | ||||| Sbjct 4411117 CGGTGACTGGACGCTCTTCTGCCCCAATGAGGCCCCTGGCCTAGCTGATGTCTACGGTGA 4411176 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACC 75864 ||||| || || |||||| | ||||| || ||||||| | | | ||| | | Sbjct 4411177 TGAGTTCGAGGCTCTCTACGCCAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACCAT-CA 4411235 Query 75865 AGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATA 75923 || | | || | | ||| | || |||||| | | ||||| |||||||| | || | | Sbjct 4411236 AGGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCCCTTCA 4411295 Query 75924 TGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGA 75983 |||| |||||||||||||| ||||||||||||||||| ||||| |||| || || | Sbjct 4411296 TGCTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCGCA 4411355 Query 75984 GCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCA 76043 |||| || || ||||| || ||| | ||||||| |||||| ||||||||||| Sbjct 4411356 GCTCTAACCTGTGCACTGAGATTATCGAGTACAGTACCCCTGATGAGGTGGCTGTTTGCA 4411415 Query 76044 ATTTGGCATCAATCGCCCTTCCAAAGTATGTC 76075 | |||| || ||||||| || | |||||| Sbjct 4411416 ACCTGGCTTCTCTCGCCCTCCCCACCTATGTC 4411447 >seq2 Length=5360957 Score = 109 bits (120), Expect = 7e-19 Identities = 120/160 (75%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 ||||||| ||| || |||| || || |||||||||||||||||||||||| |||| Sbjct 1779237 CCTTCGCTTCGCGTCTGGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCCGGCTCAT 1779296 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 || | | || | ||| |||||||||| || || ||||| || || ||||| || | Sbjct 1779297 TCGCCTCCATCTTCTGGCTGAAGAAGCGTGGCCTAATGCCTGGTCTCACTTTCTCCAACG 1779356 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 | | || ||||| ||||||||||||||| || ||||| Sbjct 1779357 AGTTGATCTCCCGTGATGAGGGTCTCCACACTGACTTTGC 1779396 >seq3 Length=5002383 Score = 105 bits (116), Expect = 8e-18 Identities = 188/270 (70%), Gaps = 6/270 (2%) Strand=Plus/Plus Query 175243 TTTCTCAAGCAACCCGAGAGATATTTTGGAAGT--GGTGCCAAGATCCCCCGAGGCGCCC 175300 || ||| ||||||||||| | | | ||||| ||||| ||||| || || || ||| Sbjct 3509097 TTCCTCCAGCAACCCGAGCGGT--TCGAGAAGTTGGGTGCAAAGATTCCTCGTGGTGCCA 3509154 Query 175301 TTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAAT 175360 ||||| | ||| || ||||| || ||||| | || || |||| || ||||||| Sbjct 3509155 TTCTCTCAGGTCCCCCCGGTACTGGTAAGACATTGCTTGCTAAGGCCACTGCTGGTGAAT 3509214 Query 175361 CAAATGTCCCATTCATCCAGTG-CTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTG 175419 | || || ||| | ||||| | || | | ||||| || |||||||| ||||| Sbjct 3509215 CCGGCGTGCCTTTC-TACAGTGTCAGTGGTTCCGAGTTTGTCGAAATGTTTGTCGGTGTC 3509273 Query 175420 GGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTC 175479 || || | || ||||||||||| | || |||||| | ||| || || || || Sbjct 3509274 GGACCCTCTCGTGTCCGCGATCTCTTCGCAACCGCCCGGAAGAATACCCCCTGCATCATC 3509333 Query 175480 TTCATTGATGAGATTGATGCGGTGGGCAAG 175509 ||||||||||| ||||||||| | || ||| Sbjct 3509334 TTCATTGATGAAATTGATGCGATTGGAAAG 3509363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569480686080