Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1 223 4e-53
seq2 109 7e-19
seq3 105 8e-18
>seq1
Length=8587311
Score = 223 bits (246), Expect = 4e-53
Identities = 577/872 (66%), Gaps = 13/872 (1%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| || || | ||||| || || |||| || ||||| || |||||||| | |
Sbjct 4410581 CCTCAGCACTTGCTGATGCGTGTTGCTGTCGGAATTCACGGCGAGGACATTGAGAAGGCC 4410640
Query 75272 TTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTT 75330
| ||||||||| || |||||||||| ||| |||| |||||| | || || || ||
Sbjct 4410641 ATTGAGACATACCACTTGATGTCCCAAAAGTAC-TTCACTCACGCCTCCCCCACTCTGTT 4410699
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
|||||| | ||| || ||| ||| | | ||||||||| | | | | | ||
Sbjct 4410700 CAATGCCGCTACTCCCCAACCCCAGCTCGCATCTTGCTTCCTGGTTGACGTGAGCGCAGA 4410759
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
| || | ||||| |||| ||||| | | ||||| ||||| ||| |||||
Sbjct 4410760 CAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGACCGCTGG 4410819
Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510
||||| || | | |||| | | || | ||| ||| || || ||
Sbjct 4410820 TGGTATCGGTCTCAATGTCCACCGCATTCGCGCTACCGGTTCTTACATTGCTGGAACCAA 4410879
Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570
|| || | |||||| |||| ||||| || || |||||| ||| || || |||||
Sbjct 4410880 CGGCTCCTCCAACGGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCACGTTATGT 4410939
Query 75571 AAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGGCA 75624
| || ||| || |||| | || || | || ||||| |||| || |||||
Sbjct 4410940 GGACCA---GGGTGGTAACAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGGCA 4410996
Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684
|||||| || | |||||||| || | || || || ||| | || |||| |||
Sbjct 4410997 CGCCGATGTCTTCGAGTTCCTCGATCTGCGCAAGAATCACGGTAAGGAGGAGGTTCGCGC 4411056
Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744
| | || || || | | ||||||| || || || ||||||||||| || ||||
Sbjct 4411057 TCGTGACCTTTTCTACGCTCTGTGGACCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAA 4411116
Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804
||| | ||| | || ||||| || | |||| || || || | || | |||||
Sbjct 4411117 CGGTGACTGGACGCTCTTCTGCCCCAATGAGGCCCCTGGCCTAGCTGATGTCTACGGTGA 4411176
Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACC 75864
||||| || || |||||| | ||||| || ||||||| | | | ||| | |
Sbjct 4411177 TGAGTTCGAGGCTCTCTACGCCAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACCAT-CA 4411235
Query 75865 AGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATA 75923
|| | | || | | ||| | || |||||| | | ||||| |||||||| | || | |
Sbjct 4411236 AGGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCCCTTCA 4411295
Query 75924 TGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGA 75983
|||| |||||||||||||| ||||||||||||||||| ||||| |||| || || |
Sbjct 4411296 TGCTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCGCA 4411355
Query 75984 GCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCA 76043
|||| || || ||||| || ||| | ||||||| |||||| |||||||||||
Sbjct 4411356 GCTCTAACCTGTGCACTGAGATTATCGAGTACAGTACCCCTGATGAGGTGGCTGTTTGCA 4411415
Query 76044 ATTTGGCATCAATCGCCCTTCCAAAGTATGTC 76075
| |||| || ||||||| || | ||||||
Sbjct 4411416 ACCTGGCTTCTCTCGCCCTCCCCACCTATGTC 4411447
>seq2
Length=5360957
Score = 109 bits (120), Expect = 7e-19
Identities = 120/160 (75%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128
||||||| ||| || |||| || || |||||||||||||||||||||||| ||||
Sbjct 1779237 CCTTCGCTTCGCGTCTGGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCCGGCTCAT 1779296
Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188
|| | | || | ||| |||||||||| || || ||||| || || ||||| || |
Sbjct 1779297 TCGCCTCCATCTTCTGGCTGAAGAAGCGTGGCCTAATGCCTGGTCTCACTTTCTCCAACG 1779356
Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228
| | || ||||| ||||||||||||||| || |||||
Sbjct 1779357 AGTTGATCTCCCGTGATGAGGGTCTCCACACTGACTTTGC 1779396
>seq3
Length=5002383
Score = 105 bits (116), Expect = 8e-18
Identities = 188/270 (70%), Gaps = 6/270 (2%)
Strand=Plus/Plus
Query 175243 TTTCTCAAGCAACCCGAGAGATATTTTGGAAGT--GGTGCCAAGATCCCCCGAGGCGCCC 175300
|| ||| ||||||||||| | | | ||||| ||||| ||||| || || || |||
Sbjct 3509097 TTCCTCCAGCAACCCGAGCGGT--TCGAGAAGTTGGGTGCAAAGATTCCTCGTGGTGCCA 3509154
Query 175301 TTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAAT 175360
||||| | ||| || ||||| || ||||| | || || |||| || |||||||
Sbjct 3509155 TTCTCTCAGGTCCCCCCGGTACTGGTAAGACATTGCTTGCTAAGGCCACTGCTGGTGAAT 3509214
Query 175361 CAAATGTCCCATTCATCCAGTG-CTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTG 175419
| || || ||| | ||||| | || | | ||||| || |||||||| |||||
Sbjct 3509215 CCGGCGTGCCTTTC-TACAGTGTCAGTGGTTCCGAGTTTGTCGAAATGTTTGTCGGTGTC 3509273
Query 175420 GGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTC 175479
|| || | || ||||||||||| | || |||||| | ||| || || || ||
Sbjct 3509274 GGACCCTCTCGTGTCCGCGATCTCTTCGCAACCGCCCGGAAGAATACCCCCTGCATCATC 3509333
Query 175480 TTCATTGATGAGATTGATGCGGTGGGCAAG 175509
||||||||||| ||||||||| | || |||
Sbjct 3509334 TTCATTGATGAAATTGATGCGATTGGAAAG 3509363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569480686080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |