Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq3 93.3 8e-14
>seq3
Length=5002383
Score = 93.3 bits (102), Expect = 8e-14
Identities = 162/236 (69%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||| | | || || || || || | ||| | || || || ||
Sbjct 15440 ATTTGCATACCACCACGTAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTG 15499
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
|| ||||| | || | | ||| || | || ||||||||||| || | | || ||
Sbjct 15500 TAATCGGAAAGTGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGG 15559
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
||||| || || || || |||||||| || |||| || | ||| |||||||||||
Sbjct 15560 TCAGGGGGAATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTATCGGAT 15619
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| ||||| || || ||||| || || || || || || || || || |||||
Sbjct 15620 GACTCGACTTCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 15675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899654220069120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |