Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq1 194 5e-44
seq5 113 1e-19
seq3 100 8e-16
>seq1
Length=8587311
Score = 194 bits (214), Expect = 5e-44
Identities = 573/878 (65%), Gaps = 9/878 (1%)
Strand=Plus/Minus
Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687
||||| || | ||||||| |||||||||||| || || || || | |||||||||
Sbjct 4411389 CTGTACTCGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGG 4411330
Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747
||| || |||| |||||||||||||| || ||| | ||| | || ||||| ||||
Sbjct 4411329 TTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGG 4411270
Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCC 155807
|| || ||||| |||||| | | || || || |||| | | ||| |||
Sbjct 4411269 GCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCCTCC 4411210
Query 155808 GACTCATATTT--CATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAG 155865
||| || || | || | ||| | | | || |||||||| |||| || ||||
Sbjct 4411209 TGCTCGTACTTGGCGTAGAGAGCCTC--GAACTCATCACCGTAGACATCAGCTAGGCCAG 4411152
Query 155866 GGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATA 155925
|| || || |||||| || |||| ||| || | || |||| ||| || |
Sbjct 4411151 GGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGA 4411092
Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGAT 155985
||| | ||| | ||| ||||||||||| | || |||||| | |||||||
Sbjct 4411091 GATCGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACCGTGAT 4411032
Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045
|||| || || || | ||| || | ||| | || |||||||| || || ||||
Sbjct 4411031 TCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAA 4410972
Query 156046 AACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102
| ||| | |||| |||||||| || ||||| || || || || || || ||||
Sbjct 4410971 AGGCACCGGGGCGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACAC 4410912
Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162
|||||||||| |||||| ||||| | ||| |||||||| ||| | ||||| | |
Sbjct 4410911 GCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAG 4410852
Query 156163 AGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATT 156222
||||| || | || || || |||||||| | || || || || ||
Sbjct 4410851 CGCGAATGCGGTGGACATTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGG 4410792
Query 156223 CCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACG 156282
||| | ||||| ||||||| ||||| || | || | || |||| |
Sbjct 4410791 TCTTGAGAGTATCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAG 4410732
Query 156283 AACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAAT 156342
| | || ||| | || || | || ||||| || || || | || ||| | || |
Sbjct 4410731 ATGCGAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGT 4410672
Query 156343 ACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATAC 156402
|||| | ||||| | | ||||||||| | |||||||| | |||||||| |
Sbjct 4410671 ACTTTTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTC 4410612
Query 156403 AGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACT-CCATCAATTCGC 156461
|| || || | |||| || |||||||||||||| ||| || | || | ||| ||
Sbjct 4410611 CGACAGCAACACGCATCAGCAAGTGCTGAGGACGCTCAGCAA-CATTGCCGTTAATCCGA 4410553
Query 156462 AGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
|||||||||| || || || || ||||| ||||| ||
Sbjct 4410552 AGAAGGTATGACCGCTCGAGGGTCTTAAATCCGAAGTA 4410515
>seq5
Length=1643254
Score = 113 bits (124), Expect = 1e-19
Identities = 103/130 (79%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 251445 ATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACA 251504
||||||| ||||| | || || ||||| ||| | || ||||| | ||||||||
Sbjct 1248039 ATCAGATACGTCAAAGAGACGCTCCTTGAGGAAAGCACTGGCGCCGTGGGCGATCATACA 1247980
Query 251505 ATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTG 251564
|||||||||||| || ||||||||||||||||| || ||||| | |||||| |||||||
Sbjct 1247979 ATCACGCTCCATCTCTCCGAAACGAAGACCACCGTCACGAGCACGACCCTCCACAGGCTG 1247920
Query 251565 ACGAGTGAGA 251574
|||||||||
Sbjct 1247919 GCGAGTGAGA 1247910
>seq3
Length=5002383
Score = 100 bits (110), Expect = 8e-16
Identities = 81/98 (83%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 302573 CTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTG 302632
||||||||| ||||||||||| ||| || | ||||||| | ||||||| || ||||| |
Sbjct 4596796 CTTCCATACCCTTGATTAAACAACGTTGCAGGTAACCAGATCTAGATGTCTTGACAGCAG 4596737
Query 302633 TATCAATTAGACCAACACGACCACCCATAGCATGGAAG 302670
||||||| ||||| |||||||| |||| || ||||||
Sbjct 4596736 TATCAATCAGACCCTCACGACCAGCCATGGCGTGGAAG 4596699
Score = 93.3 bits (102), Expect = 1e-13
Identities = 105/140 (75%), Gaps = 3/140 (2%)
Strand=Plus/Minus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | ||||||||||||| | || ||||| ||| || | |||||||||
Sbjct 4874521 AGAATTTCCTTCAGACGGGGAACACCAAGCGTGACGTT---CTTAGATGACACACCAGCA 4874465
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
||||||||||| ||||| || | ||| || | |||||||| ||| || || ||||
Sbjct 4874464 AAGTGGAAAGTGTTCAGTGTCATTTGCGTCGCAGGCTCACCGATAGACTGAGCGGCAAGA 4874405
Query 301933 ATACCAACCATTTCTCCTGG 301952
| || |||||||| || ||
Sbjct 4874404 ACGCCGACCATTTCACCAGG 4874385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817298277392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |