Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2 125 9e-23 seq1 120 4e-21 seq3 105 8e-17 >seq2 Length=5360957 Score = 125 bits (138), Expect = 9e-23 Identities = 175/243 (72%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| ||||| |||||||||||||| | | ||||| Sbjct 1779693 GCCTTCTGGTAGTCACCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATG 1779634 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | | Sbjct 1779633 GACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 1779574 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| ||||| ||||| ||||||| |||||| || |||||||||||| | Sbjct 1779573 AGCAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGCGTTCATGCCAAGC 1779514 Query 868871 AGCGCCAC-CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929 || ||| | || || | || | | ||||| | |||||| |||| |||||||| || Sbjct 1779513 AG-GCCGCAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATTCCGACAGCCTCGACAAT 1779455 Query 868930 GAT 868932 ||| Sbjct 1779454 GAT 1779452 Score = 93.3 bits (102), Expect = 5e-13 Identities = 241/365 (66%), Gaps = 3/365 (1%) Strand=Plus/Plus Query 1726685 TGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCG 1726744 || || || | |||||||| | ||| || | || | || | | || ||||||||| Sbjct 2366872 TGGGGGTGCGAGGCGGCGCCGATGGCATCCACGGCAACGGTCAGGTTGCCATCGGTGCCG 2366931 Query 1726745 TTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCG 1726804 |||||| ||||||||| | | ||| |||| || | ||||||||||| ||| |||| Sbjct 2366932 TTCTTGTAGCCGATGGGGAAGGACAGGCCCGAGGCGAGCTCGCGGTGCAGCTGAGACTCG 2366991 Query 1726805 GTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATAAGGGGCCACCAGA 1726864 || ||||| ||||| | ||||| || | || || || | || | | | Sbjct 2366992 GTGGTGCGGGCGCCGATTGCGCCGAGCGAAATCAAATCCGCTAGGTACTGTGGGGAGATG 2367051 Query 1726865 GGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCAACAGG 1726924 | | || | ||| ||| | |||| | | || || | |||||| |||| Sbjct 2367052 GTATCTAGCATCTCTGAGGCAATGGGCAGGCC--CGTGCTCGTC-AGATCGGTGTACAGC 2367108 Query 1726925 CGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTCGCTG 1726984 || ||| | ||| || | | | | | | | | |||||| |||||||||| || Sbjct 2367109 TTACGGGACACGCGCAGACCCTTGTTGATGTTGAAGGTCTCGTCGATGTCGGGGTCGTTG 2367168 Query 1726985 GCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGACCACG 1727044 || ||||||||| ||||| || ||||| |||||||| | ||||||||||||| |||| Sbjct 2367169 ATCAAGCCCTTCCAGCCGACCGTTGTGCGGGGCTTTTCCAGGTAGGCGCGCATGATCACG 2367228 Query 1727045 CAAAG 1727049 || || Sbjct 2367229 CAGAG 2367233 >seq1 Length=8587311 Score = 120 bits (132), Expect = 4e-21 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 1628389 AGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGC 1628448 ||||| || ||||| || || ||||||| |||||| || || | | |||| | Sbjct 4411158 AGGCCAGGGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTC 4411099 Query 1628449 ATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTG 1628508 || ||||| || |||||||| ||||| || ||||| || || || ||||||||| Sbjct 4411098 ATGAAGAGATCGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTA 4411039 Query 1628509 CCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAG 1628568 ||||| ||||| || ||||| | |||| | |||||||||||||||||||||||| Sbjct 4411038 CCGTGATTCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAG 4410979 Query 1628569 CAGGCAAAGGCGCCCTTGCGCTTG 1628592 ||||||||| || ||||||| Sbjct 4410978 ATGGCAAAGGCACCGGGGCGCTTG 4410955 Score = 113 bits (124), Expect = 6e-19 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||| | || |||||| | || || || | || ||||| | || |||||| Sbjct 4904306 GCCGCCAACTACTTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAAACCGTCGCCAAC 4904365 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 |||||||||||||| || || |||||||||||||||||||| |||||| || ||| Sbjct 4904366 ATGATCAAGGGCAAATCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAGAACG 4904420 >seq3 Length=5002383 Score = 105 bits (116), Expect = 8e-17 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || |||||| ||||||||||| | || || || ||| Sbjct 4089299 GACAGCATCGGTGGAACCGTAACATGCGTGATCCGCAACGTGCCTGTGGGACTAGGTGAG 4089240 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| || ||| | || ||| ||||| |||||| ||||| ||||| || ||| Sbjct 4089239 CCCTGCTTCGATAAGCTTGAAGCCAAGCTCGGCCACGCGATGCTCAGCATCCCCGCAACC 4089180 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT 19192 ||||| |||||||| ||| ||| || Sbjct 4089179 AAGGGCTTCGAGATCGGCTCCGGCTT 4089154 Score = 91.5 bits (100), Expect = 2e-12 Identities = 215/320 (67%), Gaps = 10/320 (3%) Strand=Plus/Minus Query 18099 TGGCGAGTCGCACGGGGCGGGC-GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGC 18157 ||||||||||||| | || | |||||||||||| |||| || || ||| | || Sbjct 4089985 TGGCGAGTCGCACTGT-CGCTCTGTCGGCTGCATCGTCGATGGATGTCCTCCGGGATTGG 4089927 Query 18158 CACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCAC 18217 ||| ||||||||||||| ||||| || || |||||||| || ||||| |||| | Sbjct 4089926 AACTCACCGAGGCCGACATTCAGCCCCAAATGACCCGGCGCCGTCCTGGCCAAAGCGCTC 4089867 Query 18218 TTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCC 18277 | | || ||||| | ||| || || ||| |||||||| ||||| ||| ||| Sbjct 4089866 TCACTACCCCGCGGGATGAGAAGGACCGAGTCGAGATCCAGTCAGGCACAGAGTTCGGTA 4089807 Query 18278 TCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACT 18337 |||| || || | || | | | | | || ||| |||||||| ||| |||| Sbjct 4089806 TCACTCTTGGTACACCAATTGCCATGGTCGTCCGCAATGAGGACCAGCGCCCCAAGGACT 4089747 Query 18338 ATTCCGACATGTGCAAGG----TG---CCGCGGCCCTCACACGCCGACTACACCTACATG 18390 | || || | ||| | || || || || || ||||||| ||||||| | Sbjct 4089746 ACGGCGGCA-GCACAATGGACCTGTACCCTCGCCCTAGCCATGCCGACTTCACCTACCTT 4089688 Query 18391 GCCAAGTACGGCATCAAGGC 18410 | ||||||||| ||||||| Sbjct 4089687 GAGAAGTACGGCGTCAAGGC 4089668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107137886965072