Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq3 111 1e-19
>seq3
Length=5002383
Score = 111 bits (122), Expect = 1e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778
|| || || ||||| || || ||||| || || || || | | ||| || | || |
Sbjct 15888 AAGACCCTGACCGGAAAGACCATTACCCTTGAGGTTGAGTCTAGCGATACCATCGACAAC 15829
Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838
|| || ||||||||| ||||| || || || || || || || || ||||||||||||
Sbjct 15828 GTGAAGTCAAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGTTTGATCTTT 15769
Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898
||||| || ||||||||||| | | | |||| || |||||||| || || || ||
Sbjct 15768 GCCGGCAAGCAGCTGGAGGACGGTCGTACCCTGTCTGACTATAACATCCAGAAAGAGTCC 15709
Query 24899 ACACTACACTTGGT 24912
|| |||||||||||
Sbjct 15708 ACTCTACACTTGGT 15695
Score = 105 bits (116), Expect = 6e-18
Identities = 149/206 (72%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || ||||| || ||||| || || ||||| || | ||
Sbjct 15675 ATGCAGATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTCGAGTCATCC 15616
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| ||||| || || || || || || || ||
Sbjct 15615 GATACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 15556
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881
|||||| | ||||||||||| || ||||| |||||| ||| | || | || ||||| |
Sbjct 15555 CAACGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCG-CACAC-TTTCCGATTACA 15498
Query 24882 ACATTCAAAAGGAATCGACACTACAC 24907
|||| || |||||||| ||||| |||
Sbjct 15497 ACATCCAGAAGGAATCCACACTCCAC 15472
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| |||||| | || || | ||||| || ||||| || || || || || | |
Sbjct 15447 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACTATCACACTAGAGGTGGAGAGCTCA 15388
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || || || ||||| || ||
Sbjct 15387 GACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAG 15328
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| || || || |||||||||||| | | | || || || |||
Sbjct 15327 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCGGACTACAAC 15268
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || ||| |||||||||| |||| || |||
Sbjct 15267 ATCCAGAAGGAGAGCACTCTGCACCTGGTGTTGCGTCTGCGTGGTGGC 15220
Score = 89.7 bits (98), Expect = 5e-13
Identities = 134/187 (72%), Gaps = 4/187 (2%)
Strand=Plus/Minus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
|| || || || || || || || || || ||| ||| || | || | || || |
Sbjct 16165 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAATGTCAAGTCA 16106
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||| ||||| || || || || || || || || ||||||||||||||||| ||
Sbjct 16105 AAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTTTGATCTTTGCCGGAAAG 16046
Query 24848 CAGCTGGAGGA--TTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTAC 24905
||||| ||||| ||| | || |||| || |||||||| || ||||| || || || |
Sbjct 16045 CAGCTCGAGGACGGTCG-CACAC-TGTCCGACTATAACATCCAGAAGGAGTCCACTCTCC 15988
Query 24906 ACTTGGT 24912
| ||||
Sbjct 15987 ATCTGGT 15981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897510020480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |