Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3 111 1e-19 >seq3 Length=5002383 Score = 111 bits (122), Expect = 1e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || ||||| || || ||||| || || || || | | ||| || | || | Sbjct 15888 AAGACCCTGACCGGAAAGACCATTACCCTTGAGGTTGAGTCTAGCGATACCATCGACAAC 15829 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || ||||||||| ||||| || || || || || || || || |||||||||||| Sbjct 15828 GTGAAGTCAAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGTTTGATCTTT 15769 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 ||||| || ||||||||||| | | | |||| || |||||||| || || || || Sbjct 15768 GCCGGCAAGCAGCTGGAGGACGGTCGTACCCTGTCTGACTATAACATCCAGAAAGAGTCC 15709 Query 24899 ACACTACACTTGGT 24912 || ||||||||||| Sbjct 15708 ACTCTACACTTGGT 15695 Score = 105 bits (116), Expect = 6e-18 Identities = 149/206 (72%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || ||||| || ||||| || || ||||| || | || Sbjct 15675 ATGCAGATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTCGAGTCATCC 15616 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| ||||| || || || || || || || || Sbjct 15615 GATACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 15556 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 |||||| | ||||||||||| || ||||| |||||| ||| | || | || ||||| | Sbjct 15555 CAACGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCG-CACAC-TTTCCGATTACA 15498 Query 24882 ACATTCAAAAGGAATCGACACTACAC 24907 |||| || |||||||| ||||| ||| Sbjct 15497 ACATCCAGAAGGAATCCACACTCCAC 15472 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || | ||||| || ||||| || || || || || | | Sbjct 15447 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACTATCACACTAGAGGTGGAGAGCTCA 15388 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || ||||| || || Sbjct 15387 GACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAG 15328 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || |||||||||||| | | | || || || ||| Sbjct 15327 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCGGACTACAAC 15268 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || ||| |||||||||| |||| || ||| Sbjct 15267 ATCCAGAAGGAGAGCACTCTGCACCTGGTGTTGCGTCTGCGTGGTGGC 15220 Score = 89.7 bits (98), Expect = 5e-13 Identities = 134/187 (72%), Gaps = 4/187 (2%) Strand=Plus/Minus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 || || || || || || || || || || ||| ||| || | || | || || | Sbjct 16165 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAATGTCAAGTCA 16106 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||| ||||| || || || || || || || || ||||||||||||||||| || Sbjct 16105 AAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTTTGATCTTTGCCGGAAAG 16046 Query 24848 CAGCTGGAGGA--TTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTAC 24905 ||||| ||||| ||| | || |||| || |||||||| || ||||| || || || | Sbjct 16045 CAGCTCGAGGACGGTCG-CACAC-TGTCCGACTATAACATCCAGAAGGAGTCCACTCTCC 15988 Query 24906 ACTTGGT 24912 | |||| Sbjct 15987 ATCTGGT 15981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897510020480