Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq2 131 3e-24
seq1 129 9e-24
seq4 102 1e-15
>seq2
Length=5360957
Score = 131 bits (144), Expect = 3e-24
Identities = 181/251 (72%), Gaps = 2/251 (1%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || ||| ||||| |||||||||||||| | |
Sbjct 1779701 TGACACCAGCCTTCTGGTAGTCACCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCA 1779642
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
||||| ||||||| | ||| ||||||| | ||||| ||||| | ||||
Sbjct 1779641 AGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGA 1779582
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | | ||||||||||| |||||||| |||||||||| |||||| || ||||||||
Sbjct 1779581 GGGCCACCAGCAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGCGTTCA 1779522
Query 794071 TGCCGATGAGCGCCAC-GGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129
|||| | || ||| | ||| || | || ||| ||||| | |||||| |||| |||
Sbjct 1779521 TGCCAAGCAG-GCCGCAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATTCCGACAGCC 1779463
Query 794130 TCGATGATGAT 794140
|||| |||||
Sbjct 1779462 TCGACAATGAT 1779452
Score = 87.8 bits (96), Expect = 3e-11
Identities = 69/83 (83%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643
|| ||||||| |||||| |||||||| || |||||||| || ||||||||||| || ||
Sbjct 1779082 GGCTCCTTGATGTAGGTATCGATGAGCAGAGAGTAGGTTTCAGAGTGGATGTTCTCCATC 1779023
Query 794644 GCGATCTGGAAGCCATAAAAGCA 794666
|||||||||||| || |||||
Sbjct 1779022 ATGATCTGGAAGCCGTAGAAGCA 1779000
>seq1
Length=8587311
Score = 129 bits (142), Expect = 9e-24
Identities = 151/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 2071801 AGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGC 2071860
||||| || ||||| ||||| ||||||| |||||| ||| | | | ||||| |
Sbjct 4411158 AGGCCAGGGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTC 4411099
Query 2071861 ATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTG 2071920
|| || || ||| |||||||| |||| || || || || || || |||||||||
Sbjct 4411098 ATGAAGAGATCGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTA 4411039
Query 2071921 CCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAG 2071980
||||| ||||| ||| ||||| | |||| || ||||||||||||||||||||||||
Sbjct 4411038 CCGTGATTCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAG 4410979
Query 2071981 CAGGCAAAGGCGCCCTTGCGCTTG 2072004
||||||||| || |||||||
Sbjct 4410978 ATGGCAAAGGCACCGGGGCGCTTG 4410955
Score = 118 bits (130), Expect = 2e-20
Identities = 95/115 (83%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|||||||||||| | || |||||| ||||||| || | || ||||| ||||| ||||||
Sbjct 4904306 GCCGCCAACTACTTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAAACCGTCGCCAAC 4904365
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| ||||||||||| || || ||||| |||||||||||||| |||||| || |||
Sbjct 4904366 ATGATCAAGGGCAAATCCCCAGAGGAGATCCGCAAGACCTTCAACATCCAGAACG 4904420
>seq4
Length=4347949
Score = 102 bits (112), Expect = 1e-15
Identities = 122/163 (75%), Gaps = 2/163 (1%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||| || |||||||| ||||| |||||||||||| ||||||| || ||| | |
Sbjct 20869 GTACTTGGTCACAGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCCAGCTCACCGGGGAG 20928
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||| ||||| || | |||||||||||| |||| ||| ||| |||||| || |
Sbjct 20929 GATGAGGCGGACAGAGGTCTGGATCTCCCGGGACGAGATAGTGGACTTCTTGTT-GTAAG 20987
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTC 1485632
| ||||| | ||||||||| ||| || |||| |||||
Sbjct 20988 CAGCCAGCTTGGAGGCCTCGGTAGCGACACGCTCGAAAATGTC 21030
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916244698007024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |