Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq3 116 2e-21 seq1 105 4e-18 seq2 84.2 1e-11 >seq3 Length=5002383 Score = 116 bits (128), Expect = 2e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||||||| | |||||||||||||| ||||| |||||||| || | || |||| ||| Sbjct 15239 ACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCATCCTCC 15298 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| || |||||||| || || |||||||| | || | ||||||||||| | Sbjct 15299 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGA 15358 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || |||||| | || | || | ||| || || | || || |||||| Sbjct 15359 ATCTTGCTCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACCTCTAGTGTGATAGTCTTT 15418 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | ||||| |||||||| ||||| Sbjct 15419 CCGGTCAAAGTCTTGACAAAGATTTGCAT 15447 Score = 113 bits (124), Expect = 3e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | ||| ||| ||||| ||||||||||| || ||| | || | || Sbjct 15692 AGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGACAGGGTACGACCGTCC 15751 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||| ||||||| || |||||||| | || | ||||||||||| Sbjct 15752 TCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 15811 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| || ||| | || | || | | ||| || |||| ||| |||||| Sbjct 15812 TGGATCTTTGACTTCACGTTGTCGATGGTATCGCTAGACTCAACCTCAAGGGTAATGGTC 15871 Query 34946 TTTCCCGTGAGGGTCTTTAC 34965 ||||| || |||||||| || Sbjct 15872 TTTCCGGTCAGGGTCTTGAC 15891 Score = 109 bits (120), Expect = 4e-19 Identities = 142/194 (73%), Gaps = 8/194 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 |||||||| || | ||| ||||||||| ||||||||||| || || |||| | || Sbjct 15978 AGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGACAGTGTGCGACCGTCC 16037 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||||||||| ||||||| || |||||||| | || | ||||||||||| Sbjct 16038 TCGAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 16097 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || ||| ||||| || | ||||| || ||| ||| || |||| ||| || Sbjct 16098 TGGATCTTTGACTTGAC--AT--TGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGAT 16153 Query 34942 GGTCTTTCCCGTGA 34955 |||||| || |||| Sbjct 16154 GGTCTTGCCAGTGA 16167 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||| |||||||| ||||| || || || || |||| |||| Sbjct 15464 AGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCC 15523 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||||||||| ||||| || ||||||||||| | || | |||||||| || Sbjct 15524 TCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGAATGCCCTCCTTATCT 15583 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || ||||||| || | |||||| |||| || || Sbjct 15584 TGAATCTTGGACTTCAC--AT--TATCGATAGTATCGGATGACTCGACTTCAAGTGTGAT 15639 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || ||||| ||||| || || |||||||| Sbjct 15640 AGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 15675 >seq1 Length=8587311 Score = 105 bits (116), Expect = 4e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| ||| |||| |||| || || ||||| |||||||||| Sbjct 959570 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 959511 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 |||| || || ||||| | || | ||||||||||| | || || |||||| Sbjct 959510 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 959451 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | || | || | | ||||||||| | ||| |||||||| ||||| |||||||| || | Sbjct 959450 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 959391 Query 34968 A 34968 | Sbjct 959390 A 959390 >seq2 Length=5360957 Score = 84.2 bits (92), Expect = 1e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| ||| ||||||||| ||||| || ||||| || |||| | || Sbjct 1552186 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCC 1552127 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || |||||||||| ||||| ||||| | || | ||||||||||| Sbjct 1552126 TCGAGCTGCTTACCAGCGAAGATCAAACGTTGTTGGTCAGGGGGAATACCCTCCTTGTC 1552068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692736489904