Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq2 102 8e-17
seq3 82.4 7e-11
>seq2
Length=5360957
Score = 102 bits (112), Expect = 8e-17
Identities = 162/227 (71%), Gaps = 4/227 (2%)
Strand=Plus/Plus
Query 50502 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCC-GTGGCATTGTTGGG 50560
|| || |||| ||||| | ||||| |||| |||||| | ||| | ||| | ||||
Sbjct 1779461 GAGGCTGTCGGAATCGAGCAGGAGTTCCTCACTGACGCTCTTCCCTGCGGCCTGCTTGG- 1779519
Query 50561 CATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCA 50620
||||||||| | |||||||||||||||||||||| || || ||| | || || ||
Sbjct 1779520 CATGAACGCCAAGCTGATGTGCGAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGC 1779579
Query 50621 GCTGGGACAAC-CGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATAT 50679
|| || |||| ||| ||||| || || |||||||| || ||| | ||| |
Sbjct 1779580 CCTCGG-CAACAAGAAGTACTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCT 1779638
Query 50680 CGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50726
| |||| ||||| || ||||| ||||||| ||||| || || |||
Sbjct 1779639 CCTTGGCCGGCAAGACCAACTTCTTCGAAAAGCGTGTCGGTGACTAC 1779685
>seq3
Length=5002383
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| || |||| ||| | || | || | ||| ||||| || || ||||||||||||
Sbjct 15449 CCACCACGTAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAA 15508
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| ||||| || || || || || || ||| |||| ||||||||||| || || ||
Sbjct 15509 AGTGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGA 15568
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
||||| || || || ||| || || | | || | || || | | || |||
Sbjct 15569 ATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTATCGGATGACTCGACT 15628
Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412
|||| || | ||||||||||| | ||| || ||||| || ||||||
Sbjct 15629 TCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCATA 15676
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488543902291200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |