Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq2 140 3e-28
seq1 107 2e-18
seq3 100 3e-16
>seq2
Length=5360957
Score = 140 bits (154), Expect = 3e-28
Identities = 343/512 (67%), Gaps = 25/512 (5%)
Strand=Plus/Minus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| || ||||| || || || || ||||| || ||||| ||| || ||| |
Sbjct 1779688 CTGGTAGTCACCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGGACTC 1779629
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470
||| || ||||| |||||| | ||||| |||| ||| | ||| | || |||||
Sbjct 1779628 CATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAG 1779569
Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530
||||| || || |||||||||||||||||||| || ||||||||||| ||| | ||
Sbjct 1779568 GCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGCGTTCATGCCAAGC-AGGC 1779510
Query 120531 CACCGGCAACGCCGAC-GTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589
| | || || || | |||| ||||||| ||| || | || ||||| || |||
Sbjct 1779509 CGCAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATTCCGACAGCCTC---GACAATG- 1779454
Query 120590 CGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCG--CGTTC----GGTAGTA---CA 120640
||| | | || |||| | ||| ||| |||| || || | ||
Sbjct 1779453 -----ATA---TCCTCAACCACCTTGGGGTCGGGGCGGTGGTTCATGTGGGAGAACAGCA 1779402
Query 120641 GGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCA 120700
| || |||||||| ||||| || ||||| || || || |||| ||||||| || || |
Sbjct 1779401 GACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGA 1779342
Query 120701 GGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGA 120760
| || ||||| | ||| | |||| | |||| |||| ||| || ||| || ||||
Sbjct 1779341 GACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGA 1779282
Query 120761 ACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT-G 120819
| | |||||||| ||| ||||| |||| ||| || || || | | || | | |
Sbjct 1779281 AGATACCCTCCACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGGTTGAC-TCACGGTCG 1779223
Query 120820 TCGATCCACTTCATGGCCCACTCGGCCTTTTT 120851
| |||||| | |||||| | |||||| ||
Sbjct 1779222 TTGATCCAGCGGAGGGCCCAGTTGGCCTTCTT 1779191
>seq1
Length=8587311
Score = 107 bits (118), Expect = 2e-18
Identities = 134/181 (74%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531
||||| || ||||| |||| || ||| | | | ||||||||||||||||| ||| | ||
Sbjct 959568 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTGCCGGCGAAGAT 959510
Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591
|| ||||| ||||| || || ||||| |||||||| |||||| ||||| | ||
Sbjct 959509 CAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTC 959450
Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651
| |||||| | | ||| || |||| ||| | ||| || || ||||| || || |||||
Sbjct 959449 GATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 959390
Query 133652 A 133652
|
Sbjct 959389 A 959389
>seq3
Length=5002383
Score = 100 bits (110), Expect = 3e-16
Identities = 142/198 (72%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512
|| |||| |||||||||||||| || || || || || || |||| |||||| |
Sbjct 15698 AAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGACAGGGT--ACGACCGTCCTCCA 15755
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
|||||||||| || | || | ||||||||||| || || ||||| |||||||| ||
Sbjct 15756 GCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGA 15815
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||||| ||| | | || | || ||| | | ||| || || | ||| | ||| || |
Sbjct 15816 TCTTTGACTTCACGTTGTCGATGGTATCGCTAGACTCAACCTCAAGGGTAATGGTCTTTC 15875
Query 133633 CGGTCAGAGTTTTTACGA 133650
||||||| || || ||||
Sbjct 15876 CGGTCAGGGTCTTGACGA 15893
Score = 100 bits (110), Expect = 3e-16
Identities = 128/174 (74%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || || || ||| || ||| ||| ||||||||||||||| ||
Sbjct 15993 GTGGACTCCTTCTGGATGTTATAGTCGGACAGTGTGCGACC-GTCCTCGAGCTGCTTTCC 16051
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || | ||||||||||| || || ||||| |||||||| ||||||| |||
Sbjct 16052 GGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTTGACTT 16111
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
|| | || | || ||| ||| ||| || || | ||||| ||| ||||| ||
Sbjct 16112 GACATTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 16165
Score = 98.7 bits (108), Expect = 1e-15
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
||||| || ||||| || ||||||||| | ||| ||| | ||||| |||||||| ||
Sbjct 15479 GTGGATTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCA-TCCTCAAGCTGCTTTCC 15537
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | ||||| || |||||||| || || ||||| ||||| || ||||| |||
Sbjct 15538 GGCAAAGATGAGACGTTGCTGGTCAGGGGGAATGCCCTCCTTATCTTGAATCTTGGACTT 15597
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | || |||| | ||| || || | |||| || |||||||| || ||
Sbjct 15598 CACATTATCGATAGTATCGGATGACTCGACTTCAAGTGTGATAGTCTTGCCGGTGAGTGT 15657
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||||||||||||
Sbjct 15658 CTTGACGAAAATCTGCAT 15675
Score = 86.0 bits (94), Expect = 6e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||| |||||||| || ||| | || || ||||||||||| ||||| || || ||||||
Sbjct 15293 TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTG 15352
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| ||||| ||||| | || | ||||| | | |||||| || | ||||
Sbjct 15353 TCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACCTCTAGTGTGATA 15412
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || ||||||| ||| || || || || |||||
Sbjct 15413 GTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 15447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420703315840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |