Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2 140 3e-28 seq1 107 2e-18 seq3 100 3e-16 >seq2 Length=5360957 Score = 140 bits (154), Expect = 3e-28 Identities = 343/512 (67%), Gaps = 25/512 (5%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || ||||| || || || || ||||| || ||||| ||| || ||| | Sbjct 1779688 CTGGTAGTCACCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGGACTC 1779629 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | ||||| |||| ||| | ||| | || ||||| Sbjct 1779628 CATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAG 1779569 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 ||||| || || |||||||||||||||||||| || ||||||||||| ||| | || Sbjct 1779568 GCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGCGTTCATGCCAAGC-AGGC 1779510 Query 120531 CACCGGCAACGCCGAC-GTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGG 120589 | | || || || | |||| ||||||| ||| || | || ||||| || ||| Sbjct 1779509 CGCAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATTCCGACAGCCTC---GACAATG- 1779454 Query 120590 CGAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCG--CGTTC----GGTAGTA---CA 120640 ||| | | || |||| | ||| ||| |||| || || | || Sbjct 1779453 -----ATA---TCCTCAACCACCTTGGGGTCGGGGCGGTGGTTCATGTGGGAGAACAGCA 1779402 Query 120641 GGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCA 120700 | || |||||||| ||||| || ||||| || || || |||| ||||||| || || | Sbjct 1779401 GACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGA 1779342 Query 120701 GGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGA 120760 | || ||||| | ||| | |||| | |||| |||| ||| || ||| || |||| Sbjct 1779341 GACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGA 1779282 Query 120761 ACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT-G 120819 | | |||||||| ||| ||||| |||| ||| || || || | | || | | | Sbjct 1779281 AGATACCCTCCACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGGTTGAC-TCACGGTCG 1779223 Query 120820 TCGATCCACTTCATGGCCCACTCGGCCTTTTT 120851 | |||||| | |||||| | |||||| || Sbjct 1779222 TTGATCCAGCGGAGGGCCCAGTTGGCCTTCTT 1779191 >seq1 Length=8587311 Score = 107 bits (118), Expect = 2e-18 Identities = 134/181 (74%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| |||| || ||| | | | ||||||||||||||||| ||| | || Sbjct 959568 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA-TCCTCGAGCTGCTTGCCGGCGAAGAT 959510 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || ||||| ||||| || || ||||| |||||||| |||||| ||||| | || Sbjct 959509 CAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTC 959450 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | |||||| | | ||| || |||| ||| | ||| || || ||||| || || ||||| Sbjct 959449 GATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 959390 Query 133652 A 133652 | Sbjct 959389 A 959389 >seq3 Length=5002383 Score = 100 bits (110), Expect = 3e-16 Identities = 142/198 (72%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 || |||| |||||||||||||| || || || || || || |||| |||||| | Sbjct 15698 AAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGACAGGGT--ACGACCGTCCTCCA 15755 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 |||||||||| || | || | ||||||||||| || || ||||| |||||||| || Sbjct 15756 GCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGA 15815 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||||| ||| | | || | || ||| | | ||| || || | ||| | ||| || | Sbjct 15816 TCTTTGACTTCACGTTGTCGATGGTATCGCTAGACTCAACCTCAAGGGTAATGGTCTTTC 15875 Query 133633 CGGTCAGAGTTTTTACGA 133650 ||||||| || || |||| Sbjct 15876 CGGTCAGGGTCTTGACGA 15893 Score = 100 bits (110), Expect = 3e-16 Identities = 128/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || || || ||| || ||| ||| ||||||||||||||| || Sbjct 15993 GTGGACTCCTTCTGGATGTTATAGTCGGACAGTGTGCGACC-GTCCTCGAGCTGCTTTCC 16051 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | ||||||||||| || || ||||| |||||||| ||||||| ||| Sbjct 16052 GGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTTGACTT 16111 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | || | || ||| ||| ||| || || | ||||| ||| ||||| || Sbjct 16112 GACATTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 16165 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| || ||||| || ||||||||| | ||| ||| | ||||| |||||||| || Sbjct 15479 GTGGATTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCA-TCCTCAAGCTGCTTTCC 15537 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| || |||||||| || || ||||| ||||| || ||||| ||| Sbjct 15538 GGCAAAGATGAGACGTTGCTGGTCAGGGGGAATGCCCTCCTTATCTTGAATCTTGGACTT 15597 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || |||| | ||| || || | |||| || |||||||| || || Sbjct 15598 CACATTATCGATAGTATCGGATGACTCGACTTCAAGTGTGATAGTCTTGCCGGTGAGTGT 15657 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||||||||| Sbjct 15658 CTTGACGAAAATCTGCAT 15675 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| |||||||| || ||| | || || ||||||||||| ||||| || || |||||| Sbjct 15293 TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTG 15352 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||| ||||| | || | ||||| | | |||||| || | |||| Sbjct 15353 TCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACCTCTAGTGTGATA 15412 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || ||||||| ||| || || || || ||||| Sbjct 15413 GTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 15447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420703315840