Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq2 170 3e-36
seq1 96.9 5e-14
>seq2
Length=5360957
Score = 170 bits (188), Expect = 3e-36
Identities = 223/303 (74%), Gaps = 13/303 (4%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || ||||||||||| || || ||||||||||||||| |||| |
Sbjct 1778786 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATCGATC 1778844
Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGCT-GAGCGACGACGAGCGCCATTTC 1455887
| | || |||| ||||| |||| || |||||| ||||| | |||
Sbjct 1778845 TTTCCAAGGATCTTCACG----ACTGGCACAACCGCTTGAACGACGATGAGCGTTACTTC 1778900
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
|| |||||||||||||| || ||||||| ||| || || || ||||||||| |
Sbjct 1778901 GTCTCCCACGTCCTCGCCTTCTT-CGCCGCCTCCGACGGTATTGTCAACGAGAACCTTGT 1778959
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
| ||||| | |||||| || | || ||||| |||| || ||||| ||||||||
Sbjct 1778960 TGAGCGCTTCAGTGGAGAGGTTCAGATCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGAT 1779019
Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
| || || ||||||||||||||||||||||| || || ||||| |||||| |||||||
Sbjct 1779020 CATGATGGAGAACATCCACTCTGAAACCTACTCTCTGCTCATCGATACCTACATCAAGGA 1779079
Query 1456068 CCC 1456070
||
Sbjct 1779080 GCC 1779082
Score = 123 bits (136), Expect = 4e-22
Identities = 188/260 (72%), Gaps = 6/260 (2%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCG-GTGGC 1456581
||||| |||||||| |||| |||||| | ||||| ||| || | || || | |||
Sbjct 1779452 ATCATTGTCGAGGCTGTCGGAATCGAGCAGGAGTTCCTCACTGACGCTCTTCCCTGCGGC 1779511
Query 1456582 GCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGC 1456641
|| | ||||||||||||| ||| |||||| |||||||||| || ||||| ||||||
Sbjct 1779512 -CTGCTTGGCATGAACGCCAA-GCTGATGTGCGAGTACATTGAGTTC-GTCGCTGACCGC 1779568
Query 1456642 CTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGAT 1456701
||||| | ||| |||||| | ||||| ||||| | ||||||| ||| | ||
Sbjct 1779569 CTGCTGGTGGCCCTCGGCAACA-AGAAGTACTACAACGCTACCAACCCCTTCGACTTCAT 1779627
Query 1456702 GGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGC 1456760
||||| ||||| | | |||||||||||||| ||||| || || || || |||
Sbjct 1779628 GGAGTCCATCTCCTTGGCCGGCAAGACCAACTTCTTCGAAAAGCGTGTCGGTGACTACCA 1779687
Query 1456761 CAAGGCCGGCGTCACCGCCA 1456780
||||| || |||| ||||
Sbjct 1779688 GAAGGCTGGTGTCATGGCCA 1779707
>seq1
Length=8587311
Score = 96.9 bits (106), Expect = 5e-14
Identities = 287/442 (65%), Gaps = 16/442 (4%)
Strand=Plus/Plus
Query 261796 CAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTG 261855
||||||| || ||||||||| ||||||||| |||||||||||||| || || | |
Sbjct 4410955 CAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTT 4411014
Query 261856 GCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTT 261915
|| || || ||||| ||||| || ||||| || |||| || || || ||
Sbjct 4411015 CCTCGATCTGCGCAAGAATCACGGTAA-GGAGGAGG-----TTCGCGCTCGTGACCTTTT 4411068
Query 261916 TTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTC 261975
|||| |||||||| ||| || || ||| ||| | | | || | | |||||| |
Sbjct 4411069 CTACGCTCTGTGGACCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAACGGTGACTGGAC 4411128
Query 261976 GCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGC 262035
|||||| ||||| ||||| || ||||| || ||| || | | || || ||
Sbjct 4411129 GCTCTTCTGCCCCAATGAGGCCCCTGGCCTAGCTGATGTCTACGGTGATGAGTTCGAGGC 4411188
Query 262036 CCTCTATG--AGNNNNNNNNNNNNNNNNNNNNNNCGC-GGACCGTCGTGCCCGCACGACA 262092
||||| | | ||| |||| || | || | |
Sbjct 4411189 TCTCTACGCCAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACCATCAAG---GCTCAGAA 4411245
Query 262093 GATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAA 262152
| |||||| |||||| ||| |||||| | ||||| || | |||| |||| |||||||
Sbjct 4411246 GCTCTGGTACGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCCCTTCATGCTCTACAA 4411305
Query 262153 GGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAGAGGCCAAC 262210
||| || |||| || || |||||| |||||||||| || | || ||| | |||
Sbjct 4411306 GGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCG-CAG-CTCTAAC 4411363
Query 262211 CTGTGCACCGAGATCGTCCAGT 262232
|||||||| ||||| || |||
Sbjct 4411364 CTGTGCACTGAGATTATCGAGT 4411385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177809656770592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |