Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq3 118 1e-21
seq1 96.9 3e-15
>seq3
Length=5002383
Score = 118 bits (130), Expect = 1e-21
Identities = 167/231 (72%), Gaps = 8/231 (3%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | |||||||| || | || |||||||| || |||||||| || |
Sbjct 15221 CCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 15280
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || |||||||||||||| || || || | ||||||||||| | ||||
Sbjct 15281 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 15340
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685
| | |||||||||| ||||| ||| | |||| | | ||||| |||| ||
Sbjct 15341 ATACCCTCCTTGTCCTGAATCTTGCTCTTGA-CGTTGTCGATGGTGTCTGAGCTC---TC 15396
Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||||| | ||||| || || || |||||||| || ||||| || |||||
Sbjct 15397 CACCTCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 15447
Score = 113 bits (124), Expect = 4e-20
Identities = 150/206 (73%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | | | ||||| |||| || ||| || || ||||| || || | |
Sbjct 15677 CCACCACGGAGACGGAGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGAC 15736
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| ||| || |||| ||||||||||| || ||||| ||||| ||||||||||| | |||
Sbjct 15737 AGGGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGA 15796
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688
| || |||||||||| ||||||| ||||| |||| | | || ||||| || || ||
Sbjct 15797 ATGCCCTCCTTGTCCTGGATCTTTGACTTCA-CGTTGTCGATGGTATCGCTAGACTCAAC 15855
Query 35689 CTCCACCGTGATCGTTTTACCCGTCA 35714
||| | || || || || || ||||
Sbjct 15856 CTCAAGGGTAATGGTCTTTCCGGTCA 15881
Score = 109 bits (120), Expect = 5e-19
Identities = 125/168 (74%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || ||||| || |||| || || || |||| || |||||||| || |||||
Sbjct 15998 CTCCTTCTGGATGTTATAGTCGGACAGTGTGCGACCGTCCTCGAGCTGCTTTCCGGCAAA 16057
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
||||| ||||||||||||| |||| || |||||||||| ||||||| ||| | | |
Sbjct 16058 GATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTTGACTTGACATT 16117
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712
| | || ||||| || || ||||| | ||||| || || || ||
Sbjct 16118 GTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 16165
>seq1
Length=8587311
Score = 96.9 bits (106), Expect = 3e-15
Identities = 132/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606
|||| || |||||||| ||| || ||| || | || || |||||||| || || || |
Sbjct 959570 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 959511
Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666
||| ||||| ||||| | |||| || |||||||||| |||||| ||| | ||||
Sbjct 959510 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGAC-GTTG 959452
Query 35667 CC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||||||||| || || || | || || || |||||||||| || || ||
Sbjct 959451 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 959392
Query 35726 AA 35727
||
Sbjct 959391 AA 959390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793509841280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |