Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq3 107 2e-18 seq1 104 2e-17 >seq3 Length=5002383 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || ||||||||||| || |||||||| ||| || ||| || || || Sbjct 15467 ACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCCTCA 15526 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| || || ||||| || | ||| ||||| || || || ||||| || || |||||| Sbjct 15527 AGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGAATGCCCTCCTTATCTTGA 15586 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || || | || ||||| || || || || || || || || || Sbjct 15587 ATCTTGGACTTCACATTATCGATAGTATCGGATGACTCGACTTCAAGTGTGATAGTCTTG 15646 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| | || || |||||||| ||||| Sbjct 15647 CCGGTGAGTGTCTTGACGAAAATCTGCAT 15675 Score = 98.7 bits (108), Expect = 1e-15 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | |||||| ||||| || || || ||||| ||||| Sbjct 15677 CCACCACGGAGACGGAGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGAC 15736 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || ||| || ||||| ||||| ||||| |||||||||||||| || || || Sbjct 15737 AGGGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGA 15796 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || ||| || || ||| | || ||| || || || Sbjct 15797 ATGCCCTCCTTGTCCTGGATCTTTGACTTCACGTTGTCGATGGTATCGCTAGACTCAACC 15856 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 || || |||||||| || ||||| | || || |||| Sbjct 15857 TCAAGGGTAATGGTCTTTCCGGTCAGGGTCTTGACGA 15893 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || || || || ||||| ||||| || ||||| |||||| Sbjct 15963 CCGCCACGGAGGCGAAGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGG-- 16020 Query 134547 ACGGTGTGAGA--GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 || ||||| || ||| |||||||| || || ||||| |||||||||||||| || || | Sbjct 16021 ACAGTGTGCGACCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGG 16080 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||| || || || || || ||| ||||| ||| | || ||| || || | Sbjct 16081 GAATGCCCTCCTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTATCGCTGGACTCAA 16140 Query 134665 CGTCGAGAGTAATGGTTTTACCGGT 134689 | || || || ||||| || || || Sbjct 16141 CCTCAAGGGTGATGGTCTTGCCAGT 16165 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||||||| ||||| || ||| ||||| || ||||||||||| || || | Sbjct 15230 AGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGG 15289 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| || || || || || | ||||||||| || || || || || || Sbjct 15290 CCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCC 15349 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| || ||||| ||| | ||||| || ||||| || || || Sbjct 15350 TTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACCTCTAGTGTG 15409 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| ||||| || || || |||||||| Sbjct 15410 ATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 15447 >seq1 Length=8587311 Score = 104 bits (114), Expect = 2e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || ||||||||||||| | |||| | || |||||||| ||||| || || | Sbjct 959570 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 959511 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 ||| |||||| || || || || ||||| || || || || || || ||||| || Sbjct 959510 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 959451 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | |||||| ||| || || ||||| |||||||| ||||| || | || || |||| Sbjct 959450 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 959391 Query 134704 AA 134705 || Sbjct 959390 AA 959389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398298920320