Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq1 183 4e-41
seq2 93.3 6e-14
>seq1
Length=8587311
Score = 183 bits (202), Expect = 4e-41
Identities = 738/1151 (64%), Gaps = 16/1151 (1%)
Strand=Plus/Minus
Query 69268 AGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATC 69327
|| || | ||| || || || ||||| || ||||||| || | || | || |||
Sbjct 4411434 AGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACTGTACTCGATAATC 4411375
Query 69328 TCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTA 69387
|| || || || ||| | ||||| ||||| || | ||| |||||||| |||||
Sbjct 4411374 TCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTG 4411315
Query 69388 CAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGAT 69447
|| || |||||||| || || || || ||||||| ||| |||| | |||| ||| |
Sbjct 4411314 CAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCG 4411255
Query 69448 TTCCAAACGACCCTAGCATTTATTACGGTCTTGTA---ACGCTTCTCTTTTTCATATT-- 69502
| ||| | | ||| || || ||||||| ||| ||| | || || |
Sbjct 4411254 TACCAGAGCTTCTGAGCCTTGAT---GGTCTTGCGGCCACGGCCCTCCTGCTCGTACTTG 4411198
Query 69503 GTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTG 69562
| ||| | |||| ||||| ||||| || | |||||| | | ||||| ||||| |
Sbjct 4411197 GCGTAGAGAGCC--TCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGG 4411140
Query 69563 GACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCC 69622
| || | | | ||| || | | ||| || || ||||| || |||||||| |||
Sbjct 4411139 GGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCC 4411080
Query 69623 AAAGAGC-TATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGA 69681
| ||||| || ||| || || | | | | || || || || ||| || |||
Sbjct 4411079 ACAGAGCGTAGAAA-AGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGA 4411021
Query 69682 TCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGT 69741
||||| ||||| | | ||| | ||||| || || || || || || | | | || ||
Sbjct 4411020 TCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGG 4410961
Query 69742 CGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGA 69801
|| || || || ||||| || | || | || ||||| ||| | || | |||||| |||
Sbjct 4410960 CGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGGA 4410901
Query 69802 ATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTA 69861
| |||||| || || || || ||||||| ||| ||| || | ||||||||
Sbjct 4410900 ACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAATGCGG 4410841
Query 69862 CTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTG 69921
| | ||||| || || || || | || ||||| | ||||| || | ||
Sbjct 4410840 TGGACATTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTA 4410781
Query 69922 TCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGA 69981
||||| |||||||| ||||| || | ||| || || || || || | | ||
Sbjct 4410780 TCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCGAGCTGG 4410721
Query 69982 TGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAA 70041
| || ||| | ||||| || | || || || ||||||||||| | |||| ||
Sbjct 4410720 GGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGGGAC 4410661
Query 70042 AGCAGATTGTATGTTTCAATAGCTGATTCTATATCC-CACTGATGAATTCCTATCGCGAC 70100
| || | |||||| ||||| || || || ||| | | | |||||||| | || ||
Sbjct 4410660 ATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCG-TGAATTCCGACAGCAAC 4410602
Query 70101 ACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGA 70160
|||||||| || |||||||| || || | || || || | ||||||||
Sbjct 4410601 ACGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATCCGAAGAAGGTATGA 4410542
Query 70161 TTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAAC 70220
|| || || ||||| || || |||||||| ||||| | ||||| | |||| |
Sbjct 4410541 CCGCTCGAGGGTCTTAAATCCGAAGTAGTTGTAGTTGAAGTCACGGTCGTACACAATAGC 4410482
Query 70221 AGAATTTAGTTTATCCTTATATTTGGTAACTATATCCATAACAGT-AGGTGAGATAATCG 70279
|| || || | || || || |||| || | | || | | |||||| || |
Sbjct 4410481 CGAGTTGAGCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTCATCTGAGATCATAG 4410423
Query 70280 GAGATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAA 70339
||| | ||| ||||| || || ||||| | | | | ||| || || |
Sbjct 4410422 GAGCGGGCTTATTGTTTTTGGGGTTGACATAATGGTAGAGATCGGAGATGACCATGGAGA 4410363
Query 70340 ATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCAT 70399
|| | |||||||||| |||||| | || || | ||| || | || || ||||| || |
Sbjct 4410362 ATTGCTTTTTTGTTTGCTTGTGGAGGTTGGAAACGGCGATACGTGCAGCCAGAATGGCGT 4410303
Query 70400 AGTCAGGATGT 70410
|||| || |||
Sbjct 4410302 AGTCGGGGTGT 4410292
>seq2
Length=5360957
Score = 93.3 bits (102), Expect = 6e-14
Identities = 110/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676
|| || |||||| || || |||||||| | || || ||||| || || |||||
Sbjct 1779399 CAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGA 1779340
Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736
||||||||||| |||||||| || ||||| || |||| || || || || || ||||||
Sbjct 1779339 CCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAG 1779280
Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAG 39765
|| || || || || || || ||||| ||
Sbjct 1779279 ATACCCTCCACAGCGGCGAAGGCAACCAG 1779251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908662618240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |