Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1 215 6e-51 seq2 132 6e-26 seq3 86.0 8e-12 >seq1 Length=8587311 Score = 215 bits (238), Expect = 6e-51 Identities = 387/562 (69%), Gaps = 5/562 (1%) Strand=Plus/Minus Query 118694 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 118753 |||||| | || ||||||| || ||||| || || |||| |||||| | | Sbjct 4411447 GACATAGGTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACT 4411388 Query 118754 GTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 118813 |||||| ||||| || ||||||| ||| || || ||| || |||| |||||| || || Sbjct 4411387 GTACTCGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTT 4411328 Query 118814 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 118873 ||| |||| || ||||||||||| |||||| | || | || ||||| || |||| Sbjct 4411327 ACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGC 4411268 Query 118874 CTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTT 118932 || |||||| || | ||||| | || | || | | || | | | || ||||| | Sbjct 4411267 CTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG-ATGGTCTTGCGGCCACGGCCCTCCT 4411209 Query 118933 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTG 118992 ||||||||| | |||||| || || ||||| ||||| | | || | || || || | Sbjct 4411208 GCTCGTACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGG 4411149 Query 118993 CCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGT 119052 ||| || ||||||||||| | ||| | ||| |||| || |||||||||||||| | Sbjct 4411148 CCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGAT 4411089 Query 119053 CTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGA 119112 | ||| |||| || || |||| || || ||| |||| | || || | || ||||| Sbjct 4411088 CGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCT 4411029 Query 119113 GACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG 119172 |||| || | || || | || ||| ||||||||||| |||||||| | || | | Sbjct 4411028 TGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGG 4410969 Query 119173 ACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAA 119229 || || |||| |||||| ||||| | || ||| |||||| ||||| | Sbjct 4410968 CACCGGGGCGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCA 4410909 Query 119230 GCATTGGAATGATACCATCGGA 119251 |||| |||| ||||| | ||| Sbjct 4410908 GCATAGGAACAATACCGTTGGA 4410887 >seq2 Length=5360957 Score = 132 bits (146), Expect = 6e-26 Identities = 305/457 (67%), Gaps = 18/457 (4%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || || ||||| ||||||||||| ||||| ||| ||||| ||| |||||| Sbjct 1779684 TAGTCACCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGGACTCCATG 1779625 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAGG 129841 || || || ||||| | | ||| | ||| || | | | | | || Sbjct 1779624 AAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC------AGC 1779571 Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901 || || || | |||| ||||||||||||| ||||| || || |||||| || | ||| Sbjct 1779570 AGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGCGTTCATGCCAAGCAGG 1779511 Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961 || || || ||||| || |||| ||| ||| || | ||||| || | ||| Sbjct 1779510 CCGCAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATTCCGACAGCCTCGACAATGATA 1779451 Query 129962 GCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---GCA 130018 | | || || | | | || | | | || | | | ||| || ||| Sbjct 1779450 TCCTCAACCACCTTGGGGTCGGGGCGGTGGTTCA---TGTGGGAGAACAGCAGACAAGCA 1779394 Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078 || || |||||||||||| ||||||||||| | || || ||||| ||||| ||| Sbjct 1779393 AAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACCAGGC 1779334 Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138 || || || |||||||||| |||||| || | |||||||| ||||||||||| ||| Sbjct 1779333 ATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATACCC 1779274 Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 |||||| ||||| |||| |||||| ||| |||| Sbjct 1779273 TCCACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGG 1779237 >seq3 Length=5002383 Score = 86.0 bits (94), Expect = 8e-12 Identities = 326/504 (65%), Gaps = 27/504 (5%) Strand=Plus/Minus Query 14063 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 14122 || ||||| || || || || | ||| || | |||||| | ||| || || || | Sbjct 3509536 CGGTCAAATCGTCCGGGACGCATGAGTGCCTTGTCAAGAACATCCGGTCGATTGGTACCA 3509477 Query 14123 GCGATGACAACGA--TGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGAT 14180 || | |||||| | ||| | | ||| || |||||||||||||| | | || | Sbjct 3509476 GCCAAGACAACCACTTGCTCAGA--GGTATTGAAACCATCCATCTCAGTGAGAATCTGGT 3509419 Query 14181 TGATGGTTTGTTCGCGTTCATCATTCGCAGGCATACCACC--CGCACTGCGTTGCT---- 14234 ||| || ||| |||||||| || || ||||| || | | ||||| Sbjct 3509418 TGAGAGTGCTTTCACGTTCATCGTTTCCA------CCACCAACGTTCGACTTTGCTCGAG 3509365 Query 14235 ---TACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAA 14291 | || | || ||||||||||| ||||| | ||| || || ||| | ||||| Sbjct 3509364 ACTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCGG 3509305 Query 14292 CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG 14351 | | |||| ||| || || | || |||||||| |||||||| || ||||| | || Sbjct 3509304 TTGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCGG 3509245 Query 14352 --CGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAG 14409 | | | ||| || | ||| || ||| |||||||| || |||| || || | Sbjct 3509244 AACCACTG-ACACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCAA 3509187 Query 14410 GGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC--A 14467 ||||| || || || || |||| ||||| ||||||||| || ||| | ||||| | Sbjct 3509186 TGTCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCAA 3509127 Query 14468 CTGCCAAAGTAGCGTTCAGGTTGTTTAAGGAAGTCCACGATTTCTTCCAATTCATCCTTC 14527 || | | | || || ||||| | |||||| |||| ||| | ||| |||| Sbjct 3509126 CTTC--TCGAACCGCTCGGGTTGCTGGAGGAAGCTAACGAATTCCATGATCTCAACCTTG 3509069 Query 14528 GCGGCGTCGATGCCTTCAACGTCA 14551 || |||| || || |||||||| Sbjct 3509068 GCTTCGTCCATACCAGCAACGTCA 3509045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435076312960