Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq1 215 6e-51
seq2 132 6e-26
seq3 86.0 8e-12
>seq1
Length=8587311
Score = 215 bits (238), Expect = 6e-51
Identities = 387/562 (69%), Gaps = 5/562 (1%)
Strand=Plus/Minus
Query 118694 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 118753
|||||| | || ||||||| || ||||| || || |||| |||||| | |
Sbjct 4411447 GACATAGGTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACT 4411388
Query 118754 GTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 118813
|||||| ||||| || ||||||| ||| || || ||| || |||| |||||| || ||
Sbjct 4411387 GTACTCGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTT 4411328
Query 118814 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 118873
||| |||| || ||||||||||| |||||| | || | || ||||| || ||||
Sbjct 4411327 ACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGC 4411268
Query 118874 CTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTT 118932
|| |||||| || | ||||| | || | || | | || | | | || ||||| |
Sbjct 4411267 CTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG-ATGGTCTTGCGGCCACGGCCCTCCT 4411209
Query 118933 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTG 118992
||||||||| | |||||| || || ||||| ||||| | | || | || || || |
Sbjct 4411208 GCTCGTACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGG 4411149
Query 118993 CCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGT 119052
||| || ||||||||||| | ||| | ||| |||| || |||||||||||||| |
Sbjct 4411148 CCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGAT 4411089
Query 119053 CTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGA 119112
| ||| |||| || || |||| || || ||| |||| | || || | || |||||
Sbjct 4411088 CGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCT 4411029
Query 119113 GACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG 119172
|||| || | || || | || ||| ||||||||||| |||||||| | || | |
Sbjct 4411028 TGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGG 4410969
Query 119173 ACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAA 119229
|| || |||| |||||| ||||| | || ||| |||||| ||||| |
Sbjct 4410968 CACCGGGGCGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCA 4410909
Query 119230 GCATTGGAATGATACCATCGGA 119251
|||| |||| ||||| | |||
Sbjct 4410908 GCATAGGAACAATACCGTTGGA 4410887
>seq2
Length=5360957
Score = 132 bits (146), Expect = 6e-26
Identities = 305/457 (67%), Gaps = 18/457 (4%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| || || ||||| ||||||||||| ||||| ||| ||||| ||| ||||||
Sbjct 1779684 TAGTCACCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGGACTCCATG 1779625
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAGG 129841
|| || || ||||| | | ||| | ||| || | | | | | ||
Sbjct 1779624 AAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC------AGC 1779571
Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901
|| || || | |||| ||||||||||||| ||||| || || |||||| || | |||
Sbjct 1779570 AGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGCGTTCATGCCAAGCAGG 1779511
Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961
|| || || ||||| || |||| ||| ||| || | ||||| || | |||
Sbjct 1779510 CCGCAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATTCCGACAGCCTCGACAATGATA 1779451
Query 129962 GCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---GCA 130018
| | || || | | | || | | | || | | | ||| || |||
Sbjct 1779450 TCCTCAACCACCTTGGGGTCGGGGCGGTGGTTCA---TGTGGGAGAACAGCAGACAAGCA 1779394
Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078
|| || |||||||||||| ||||||||||| | || || ||||| ||||| |||
Sbjct 1779393 AAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACCAGGC 1779334
Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138
|| || || |||||||||| |||||| || | |||||||| ||||||||||| |||
Sbjct 1779333 ATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATACCC 1779274
Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175
|||||| ||||| |||| |||||| ||| ||||
Sbjct 1779273 TCCACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGG 1779237
>seq3
Length=5002383
Score = 86.0 bits (94), Expect = 8e-12
Identities = 326/504 (65%), Gaps = 27/504 (5%)
Strand=Plus/Minus
Query 14063 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 14122
|| ||||| || || || || | ||| || | |||||| | ||| || || || |
Sbjct 3509536 CGGTCAAATCGTCCGGGACGCATGAGTGCCTTGTCAAGAACATCCGGTCGATTGGTACCA 3509477
Query 14123 GCGATGACAACGA--TGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGAT 14180
|| | |||||| | ||| | | ||| || |||||||||||||| | | || |
Sbjct 3509476 GCCAAGACAACCACTTGCTCAGA--GGTATTGAAACCATCCATCTCAGTGAGAATCTGGT 3509419
Query 14181 TGATGGTTTGTTCGCGTTCATCATTCGCAGGCATACCACC--CGCACTGCGTTGCT---- 14234
||| || ||| |||||||| || || ||||| || | | |||||
Sbjct 3509418 TGAGAGTGCTTTCACGTTCATCGTTTCCA------CCACCAACGTTCGACTTTGCTCGAG 3509365
Query 14235 ---TACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAA 14291
| || | || ||||||||||| ||||| | ||| || || ||| | |||||
Sbjct 3509364 ACTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCGG 3509305
Query 14292 CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG 14351
| | |||| ||| || || | || |||||||| |||||||| || ||||| | ||
Sbjct 3509304 TTGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCGG 3509245
Query 14352 --CGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAG 14409
| | | ||| || | ||| || ||| |||||||| || |||| || || |
Sbjct 3509244 AACCACTG-ACACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCAA 3509187
Query 14410 GGTCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC--A 14467
||||| || || || || |||| ||||| ||||||||| || ||| | ||||| |
Sbjct 3509186 TGTCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCAA 3509127
Query 14468 CTGCCAAAGTAGCGTTCAGGTTGTTTAAGGAAGTCCACGATTTCTTCCAATTCATCCTTC 14527
|| | | | || || ||||| | |||||| |||| ||| | ||| ||||
Sbjct 3509126 CTTC--TCGAACCGCTCGGGTTGCTGGAGGAAGCTAACGAATTCCATGATCTCAACCTTG 3509069
Query 14528 GCGGCGTCGATGCCTTCAACGTCA 14551
|| |||| || || ||||||||
Sbjct 3509068 GCTTCGTCCATACCAGCAACGTCA 3509045
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435076312960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |