Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1 205 1e-47
seq3 120 4e-22
seq2 109 6e-19
>seq1
Length=8587311
Score = 205 bits (226), Expect = 1e-47
Identities = 580/879 (66%), Gaps = 23/879 (3%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| || || | ||||| || || |||| ||||| || || |||||||| | |
Sbjct 4410581 CCTCAGCACTTGCTGATGCGTGTTGCTGTCGGAATTCACGGCGAGGACATTGAGAAGGCC 4410640
Query 104282 TTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||||||| || |||||||||| ||| |||| |||||| | || || || ||
Sbjct 4410641 ATTGAGACATACCACTTGATGTCCCAAAAGTAC-TTCACTCACGCCTCCCCCACTCTGTT 4410699
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
|||||| | ||| || |||||| | | ||||||||| | | | | | ||
Sbjct 4410700 CAATGCCGCTACTCCCCAACCCCAGCTCGCATCTTGCTTCCTGGTTGACGTGAGCGCAGA 4410759
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
| || | ||||| |||| ||||| | | ||||| ||||| ||| |||||
Sbjct 4410760 CAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGACCGCTGG 4410819
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
||||| || | | |||| | | || | ||| ||| || || ||
Sbjct 4410820 TGGTATCGGTCTCAATGTCCACCGCATTCGCGCTACCGGTTCTTACATTGCTGGAACCAA 4410879
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
|| || | |||||| |||| ||||| || || |||||| ||| || || |||||
Sbjct 4410880 CGGCTCCTCCAACGGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCACGTTATGT 4410939
Query 104581 AAATCAAGCTGGGCGTCGAAAG------GGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634
| || | ||| | ||| || | | || |||| || ||||| |||||
Sbjct 4410940 GGACCAGGGTGG---TAACAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGGCA 4410996
Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG--CGCGG 104692
||| ||| || | |||||||| || |||| || || ||| | ||||||| ||||
Sbjct 4410997 CGCCGATGTCTTCGAGTTCCTCGATCTGCGCAAGAATCACGGTAAGGAGGAGGTTCGCGC 4411056
Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752
| || || || |||| |||||| |||| || ||||||||||||||| | || ||||
Sbjct 4411057 T--CGTGACCTTTTCTACGCTCTGTGGACCCCCGATCTCTTCATGAAGCGCGTCGAGGCC 4411114
Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812
| || | ||| | ||||| || || | |||| ||||| || | |||| | |||
Sbjct 4411115 AACGGTGACTGGACGCTCTTCTGCCCCAATGAGGCCCCTGGCCTAGCTGATGTCTACGGT 4411174
Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGACGGT 104871
|| ||||| || || || ||| | ||||||||| | || || || ||| | ||| |
Sbjct 4411175 GATGAGTTCGAGGCTCTCTACGCCAAGTACGAGCAGGAGGGCCGTGGCCGC-AAGACCAT 4411233
Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930
| || | || | | ||| | || |||||| || | || || |||||||||| || |
Sbjct 4411234 -CAAGGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCCCT 4411292
Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990
|||||| ||||| || || || ||| | |||||||| || ||||| ||||| ||
Sbjct 4411293 TCATGCTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTC 4411352
Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAG--ACAAAGATGAGACGGCTGT 105048
|| || || || || || || || | || ||||| | |||||| ||||||
Sbjct 4411353 GCAGCTCTAACCTGTGCACTGAGATTATCGA--GTACAGTACCCCTGATGAGGTGGCTGT 4411410
Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA 105087
|| ||||| || || |||| ||||||| ||||| ||
Sbjct 4411411 TTGCAACCTGGCTTCTCTCGCCCTCCCCACCTATGTCGA 4411449
>seq3
Length=5002383
Score = 120 bits (132), Expect = 4e-22
Identities = 285/425 (67%), Gaps = 27/425 (6%)
Strand=Plus/Minus
Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583
|| ||||| || || ||||| | ||| || | ||||| | ||| ||||| || |
Sbjct 3509536 CGGTCAAATCGTCCGGGACGCATGAGTGCCTTGTCAAGAACATCCGGTCGATTGGTACCA 3509477
Query 9584 GCGATGACAACAATACCTGTTTCAT---TATCAAAACCATCCATCTCTGTCAAAAGTTGG 9640
|| | |||||| | || ||| ||| |||||||||||||| || | || |||
Sbjct 3509476 GCCAAGACAACCA---CTTGCTCAGAGGTATTGAAACCATCCATCTCAGTGAGAATCTGG 3509420
Query 9641 TTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTG--CGTTGCT--- 9695
|| | ||| ||| |||||||| || | ||||||| | | | |||||
Sbjct 3509419 TTGAGAGTGCTTTCACGTTCATCGTTTCC------ACCACCAACGTTCGACTTTGCTCGA 3509366
Query 9696 ----TTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCG 9751
|||| | |||||||| ||||||||||||| |||||| || ||| | || |||
Sbjct 3509365 GACTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCG 3509306
Query 9752 ACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTT 9811
| | |||||||| || ||||| || || ||||| |||||||| || ||||| |
Sbjct 3509305 GTTGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCG 3509246
Query 9812 G--CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 9869
| | | | ||| || | ||| || || |||||||| ||| |||| || || |
Sbjct 3509245 GAACCACTG-ACACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCA 3509188
Query 9870 GAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC-- 9927
|||||||| ||||| || ||| | ||| | |||||| || |||||||| || ||
Sbjct 3509187 ATGTCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCA 3509128
Query 9928 ACTTC 9932
|||||
Sbjct 3509127 ACTTC 3509123
>seq2
Length=5360957
Score = 109 bits (120), Expect = 6e-19
Identities = 120/160 (75%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855
|||| ||| ||| || | || || || ||| ||||||||||||||||| || || |
Sbjct 1779237 CCTTCGCTTCGCGTCTGGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCCGGCTCAT 1779296
Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915
|| | | || | ||||| |||||||| || || ||||| |||||| ||||||||||
Sbjct 1779297 TCGCCTCCATCTTCTGGCTGAAGAAGCGTGGCCTAATGCCTGGTCTCACTTTCTCCAACG 1779356
Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
|| | ||||| ||||| ||||| |||||| || |||||
Sbjct 1779357 AGTTGATCTCCCGTGATGAGGGTCTCCACACTGACTTTGC 1779396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260683347840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |