Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1 205 1e-47 seq3 120 4e-22 seq2 109 6e-19 >seq1 Length=8587311 Score = 205 bits (226), Expect = 1e-47 Identities = 580/879 (66%), Gaps = 23/879 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| || || | ||||| || || |||| ||||| || || |||||||| | | Sbjct 4410581 CCTCAGCACTTGCTGATGCGTGTTGCTGTCGGAATTCACGGCGAGGACATTGAGAAGGCC 4410640 Query 104282 TTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||||||| || |||||||||| ||| |||| |||||| | || || || || Sbjct 4410641 ATTGAGACATACCACTTGATGTCCCAAAAGTAC-TTCACTCACGCCTCCCCCACTCTGTT 4410699 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 |||||| | ||| || |||||| | | ||||||||| | | | | | || Sbjct 4410700 CAATGCCGCTACTCCCCAACCCCAGCTCGCATCTTGCTTCCTGGTTGACGTGAGCGCAGA 4410759 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | || | ||||| |||| ||||| | | ||||| ||||| ||| ||||| Sbjct 4410760 CAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGACCGCTGG 4410819 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 ||||| || | | |||| | | || | ||| ||| || || || Sbjct 4410820 TGGTATCGGTCTCAATGTCCACCGCATTCGCGCTACCGGTTCTTACATTGCTGGAACCAA 4410879 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 || || | |||||| |||| ||||| || || |||||| ||| || || ||||| Sbjct 4410880 CGGCTCCTCCAACGGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCACGTTATGT 4410939 Query 104581 AAATCAAGCTGGGCGTCGAAAG------GGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634 | || | ||| | ||| || | | || |||| || ||||| ||||| Sbjct 4410940 GGACCAGGGTGG---TAACAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGGCA 4410996 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG--CGCGG 104692 ||| ||| || | |||||||| || |||| || || ||| | ||||||| |||| Sbjct 4410997 CGCCGATGTCTTCGAGTTCCTCGATCTGCGCAAGAATCACGGTAAGGAGGAGGTTCGCGC 4411056 Query 104693 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 104752 | || || || |||| |||||| |||| || ||||||||||||||| | || |||| Sbjct 4411057 T--CGTGACCTTTTCTACGCTCTGTGGACCCCCGATCTCTTCATGAAGCGCGTCGAGGCC 4411114 Query 104753 AGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGT 104812 | || | ||| | ||||| || || | |||| ||||| || | |||| | ||| Sbjct 4411115 AACGGTGACTGGACGCTCTTCTGCCCCAATGAGGCCCCTGGCCTAGCTGATGTCTACGGT 4411174 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGACGGT 104871 || ||||| || || || ||| | ||||||||| | || || || ||| | ||| | Sbjct 4411175 GATGAGTTCGAGGCTCTCTACGCCAAGTACGAGCAGGAGGGCCGTGGCCGC-AAGACCAT 4411233 Query 104872 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 104930 | || | || | | ||| | || |||||| || | || || |||||||||| || | Sbjct 4411234 -CAAGGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCCCT 4411292 Query 104931 ACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 104990 |||||| ||||| || || || ||| | |||||||| || ||||| ||||| || Sbjct 4411293 TCATGCTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTC 4411352 Query 104991 AGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAG--ACAAAGATGAGACGGCTGT 105048 || || || || || || || || | || ||||| | |||||| |||||| Sbjct 4411353 GCAGCTCTAACCTGTGCACTGAGATTATCGA--GTACAGTACCCCTGATGAGGTGGCTGT 4411410 Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA 105087 || ||||| || || |||| ||||||| ||||| || Sbjct 4411411 TTGCAACCTGGCTTCTCTCGCCCTCCCCACCTATGTCGA 4411449 >seq3 Length=5002383 Score = 120 bits (132), Expect = 4e-22 Identities = 285/425 (67%), Gaps = 27/425 (6%) Strand=Plus/Minus Query 9524 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9583 || ||||| || || ||||| | ||| || | ||||| | ||| ||||| || | Sbjct 3509536 CGGTCAAATCGTCCGGGACGCATGAGTGCCTTGTCAAGAACATCCGGTCGATTGGTACCA 3509477 Query 9584 GCGATGACAACAATACCTGTTTCAT---TATCAAAACCATCCATCTCTGTCAAAAGTTGG 9640 || | |||||| | || ||| ||| |||||||||||||| || | || ||| Sbjct 3509476 GCCAAGACAACCA---CTTGCTCAGAGGTATTGAAACCATCCATCTCAGTGAGAATCTGG 3509420 Query 9641 TTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTG--CGTTGCT--- 9695 || | ||| ||| |||||||| || | ||||||| | | | ||||| Sbjct 3509419 TTGAGAGTGCTTTCACGTTCATCGTTTCC------ACCACCAACGTTCGACTTTGCTCGA 3509366 Query 9696 ----TTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCG 9751 |||| | |||||||| ||||||||||||| |||||| || ||| | || ||| Sbjct 3509365 GACTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCG 3509306 Query 9752 ACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTT 9811 | | |||||||| || ||||| || || ||||| |||||||| || ||||| | Sbjct 3509305 GTTGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCG 3509246 Query 9812 G--CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 9869 | | | | ||| || | ||| || || |||||||| ||| |||| || || | Sbjct 3509245 GAACCACTG-ACACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCA 3509188 Query 9870 GAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC-- 9927 |||||||| ||||| || ||| | ||| | |||||| || |||||||| || || Sbjct 3509187 ATGTCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCA 3509128 Query 9928 ACTTC 9932 ||||| Sbjct 3509127 ACTTC 3509123 >seq2 Length=5360957 Score = 109 bits (120), Expect = 6e-19 Identities = 120/160 (75%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 94796 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 94855 |||| ||| ||| || | || || || ||| ||||||||||||||||| || || | Sbjct 1779237 CCTTCGCTTCGCGTCTGGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCCGGCTCAT 1779296 Query 94856 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 94915 || | | || | ||||| |||||||| || || ||||| |||||| |||||||||| Sbjct 1779297 TCGCCTCCATCTTCTGGCTGAAGAAGCGTGGCCTAATGCCTGGTCTCACTTTCTCCAACG 1779356 Query 94916 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 || | ||||| ||||| ||||| |||||| || ||||| Sbjct 1779357 AGTTGATCTCCCGTGATGAGGGTCTCCACACTGACTTTGC 1779396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260683347840