Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq8 237 5e-57 seq3 190 6e-43 >seq8 Length=291966 Score = 237 bits (262), Expect = 5e-57 Identities = 939/1468 (64%), Gaps = 21/1468 (1%) Strand=Plus/Minus Query 349197 CCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATC 349256 |||| | || || ||| | || || || || || ||||| | ||| | | |||| | Sbjct 80094 CCGCCGTCGGTATTGATCTGGGAACCACCTACTCCTGTGTGGGTGTCTTCCGTGATGACC 80035 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | | ||||| || || || || || |||||| | || || || || | ||| | || | Sbjct 80034 GCATTGAAATCATCGCCAACGACCAGGGTAACCGCACCACCCCCTCCTTCGTCGGTTTCA 79975 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| || |||||| | || |||||| | || || || |||| ||| || || | | Sbjct 79974 CCGACACCGAGCGTCTCATCGGTGATGCCGCCAAGAACCAAGTCGCTATGAACCCCCACA 79915 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGAC----AAATCTACA 349432 | || || || ||||| ||||| || |||||| | | || ||| | || Sbjct 79914 ACACTGTCTTCGATGCCAAGCGTCTCATTGGTCGTCGCTTCCAGGACGCTGAGGTC---- 79859 Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492 ||| | ||| | || || | ||||| | || | | | ||| | | || || | Sbjct 79858 CAAGCCGATATGAAGCACTGGCCTTTCAAGGTCAT-CGAGAAGGC--TACCAAGCCCGTC 79802 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 || |||||||| | || ||||| || || || || || || || || | ||| Sbjct 79801 ATCGAGGTTGAGTTCAAGGGTGAGGTCAAGCAGTTCACTCCTGAGGAGATCTCCGCCATG 79742 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 | | || || ||| || | || || || || | |||| || || | | | ||| Sbjct 79741 ATCCTCGTCAAGATGCGCGAGACCGCCGAGGCTTACCTCGGTGGCACCGTCAATAACGCT 79682 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 || |||||||| || ||||| || || || | |||||| || || || || || || Sbjct 79681 GTCATTACTGTCCCTGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGACGCCGGT 79622 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 |||||| || | || || || | || || || || |||||||| || || ||||| Sbjct 79621 CTCATTGCCGGTCTCAACGTCCTCCGTATCATCAACGAGCCCACTGCCGCTGCCATTGCC 79562 Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || ||||| || | | || || || |||| || || ||| | |||||| Sbjct 79561 TACGGTCTTGACAAGAAGGTCGAGGGTGAGCGCAACGTTCTGATCTTCGATCTTGGTGGT 79502 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 |||||||| ||||| || || || || |||| ||||| || || || ||||| || ||| Sbjct 79501 GGTACTTTCGATGTTTCTCTCCTGACCATTGAGGAGGGTATCTTCGAGGTTAAGGCCACT 79442 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912 || ||||| || || | ||||| || || || || || ||||| || || || || Sbjct 79441 GCCGGTGACACCCACTTGGGTGGTGAGGACTTCGACAACCGTCTGGTCAACCACTTCGTC 79382 Query 349913 AAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCG 349971 || || || ||||| ||||| || | ||| || || | | || | ||||| Sbjct 79381 AACGAGTTCAAGCG-CAAGCACAAGAAGGATCTTACCACCAACGCCCGTGCTCTCCGTCG 79323 Query 349972 CCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTAT 350031 || | ||||| || || ||||| |||||| | | || || || |||| |||||||| Sbjct 79322 TCTCCGCACTGCTTGCGAGCGTGCCAAGCGTACTCTCTCTTCCGCTGCCCAGACCTCTAT 79263 Query 350032 TGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTT 350091 ||| || || ||||| || || || |||| | ||||| || ||||| || || Sbjct 79262 TGAGATCGACTCTCTCTTCGAGGGTGTCGACTTCTACACCTCTATCACCCGTGCCCGTTT 79203 Query 350092 TGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAA 350151 || || | || ||| || || | | || ||||| || || || || | Sbjct 79202 CGAGGAGCTCTGCCAGGACCTCTTCCGCGGTACCATGGAGCCCGTTGAGCGCGTCCTCCG 79143 Query 350152 AGATG-CAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACAC 350210 || | ||| | || | | || | || | || | || | || |||||||| || | Sbjct 79142 TGACGCCAAGATTGACAAGTCCTCCG-TTCACGAGATTGTCCTTGTCGGTGGTTCCACCC 79084 Query 350211 GTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGAT 350270 |||| || || | || || | | || || || || || ||| || | || | Sbjct 79083 GTATCCCCAAGATCCAGAAGCTCGTCTCCGACTTCTTCAA---CAAGGATGCCAATAAGT 79027 Query 350271 CAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTG 350330 | || || || ||||| || ||||| || ||||| || || ||||| |||| || || | Sbjct 79026 CCATCAACCCCGATGAGGCCGTTGCCTACGGTGCCGCCGTCCAGGCCGCTATCTTGTCCG 78967 Query 350331 GAAATAAGAGTTCTAA---AATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGC 350387 | | || ||| || | | || | | || || ||||| | || ||||| | Sbjct 78966 GTGACCAGTCTTCCAAGTCTACCAACGAGATCCTGCTTCTCGATGTTGCCCCTCTTTCCC 78907 Query 350388 TTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTAC 350447 | || | || || | |||| || |||||| | | ||| | || | ||| | | Sbjct 78906 TCGGTATTGAGACCGCCGGTGGTGTCATGACTCCTTTGATTAAGCGCAACACCACTATTC 78847 Query 350448 CTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTC 350507 | || || |||||| | || || || || | | ||||| ||||| | || ||| | Sbjct 78846 CCACCAAGAAGTCCGAGACCTTCTCCACCTACTCTGATAACCAGCCCGGTGTCCTAATCC 78787 Query 350508 AAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCC 350567 | || || || ||||| ||||| ||||| || || || || || ||| | || | Sbjct 78786 AGGTCTTCGAGGGTGAGCGTGCCCGCACCAAGGACAACAACCTCCTCGGAAAGTTCGAAC 78727 Query 350568 TAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTG 350627 | | || ||||| || || | || ||||| ||| |||| ||| | |||||| ||| Sbjct 78726 TTACTGGCATTCCCCCTGCCCCCCGTGGTGTTCCCCAGGTTGAGGTCACCTTCGATGTTG 78667 Query 350628 ATTCAAATGGTATTTTAAATGTTACCGC 350655 || | || ||||| | ||||| |||| Sbjct 78666 ATGCCAACGGTATCATGAATGTCTCCGC 78639 >seq3 Length=5002383 Score = 190 bits (210), Expect = 6e-43 Identities = 183/235 (78%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||||| | || ||||| || || || || || || || || || | Sbjct 15441 TTTGCATACCACCACGTAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGT 15500 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 |||| || | ||| || ||||| ||||| || ||||| |||||||| ||||||||||| | Sbjct 15501 AATCGGAAAGTGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGT 15560 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 |||| ||||| || || ||||| ||||| || | || |||||||| || | ||| |||| Sbjct 15561 CAGGGGGAATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTATCGGATG 15620 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||||||||| | ||||| ||||| ||||| || || ||||||||||| Sbjct 15621 ACTCGACTTCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 15675 Score = 120 bits (132), Expect = 9e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || ||||| |||||||| || || ||||| || Sbjct 15673 CATACCACCACGGAGACGGAGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTC 15732 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| | || || || || || || || || || |||||||| | ||| ||||| ||||| Sbjct 15733 AGACAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGG 15792 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || || ||||| || || | || || || || || | ||| | || Sbjct 15793 GGGAATGCCCTCCTTGTCCTGGATCTTTGACTTCACGTTGTCGATGGTATCGCTAGACTC 15852 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 ||| ||||| |||| ||||||||||| || || || || Sbjct 15853 AACCTCAAGGGTAATGGTCTTTCCGGTCAGGGTCTTGAC 15891 Score = 107 bits (118), Expect = 6e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | | || || || ||||| ||| || || || || || || || Sbjct 15221 CCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 15280 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || || ||||| || || || || ||||| ||||| ||||| ||||| ||||||||| Sbjct 15281 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 15340 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCT-TTTACATTATCAATCGAATCAGATGGTTCAAC 140689 || || || || |||||||| || ||| || || || || || | || || || || Sbjct 15341 ATACCCTCCTTGTCCTGAATCTT-GCTCTTGACGTTGTCGATGGTGTCTGAGCTCTCCAC 15399 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| | ||||||||||| | || || ||||| || ||||| Sbjct 15400 CTCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 15447 Score = 105 bits (116), Expect = 2e-17 Identities = 101/129 (78%), Gaps = 3/129 (2%) Strand=Plus/Minus Query 377458 CGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCAAAGTGGAAAGTATTA 377517 || || |||||| | || || ||| ||||||| |||||||||||||||||||| || Sbjct 4874506 CGGGGAACACCAAGCGTGACGTTC---TTAGATGACACACCAGCAAAGTGGAAAGTGTTC 4874450 Query 377518 AGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATAACGCCAACCATTTCT 377577 || || | ||| || | |||||||| || ||||| || |||| |||||| |||||||| Sbjct 4874449 AGTGTCATTTGCGTCGCAGGCTCACCGATAGACTGAGCGGCAAGAACGCCGACCATTTCA 4874390 Query 377578 CCAGGATTG 377586 ||||| ||| Sbjct 4874389 CCAGGGTTG 4874381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254089372848