Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq1 248 1e-60
seq4 127 2e-24
>seq1
Length=8587311
Score = 248 bits (274), Expect = 1e-60
Identities = 481/702 (69%), Gaps = 10/702 (1%)
Strand=Plus/Plus
Query 53242 TGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAA 53301
|||||| ||| |||| ||| |||||||||||| || |||||| | || || ||||||||
Sbjct 4410643 TGAGACATACCACTTGATGTCCCAAAAGTACTTCACTCACGCCTCCCCCACTCTGTTCAA 4410702
Query 53302 CGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTC 53361
|| | ||| || || ||| | | ||||||||||| | ||| | |||
Sbjct 4410703 TGCCGCTACTCCCCAACCCCAGCTCGCATCTTGCTTCCTGGTTGACGTGAGCGCAGACAG 4410762
Query 53362 GATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGG 53421
|| || || || || || || |||||| |||||| ||||||||| | |||||
Sbjct 4410763 CATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGACCGCTGGTGG 4410822
Query 53422 TATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAAC 53479
||||||| || | || || | || | || || | ||| | || || || |||
Sbjct 4410823 TATCGGTCTCAA-TG-TCCACCGCATTCGCGCTACCGGTTCTTACATTGCTGGAACCAAC 4410880
Query 53480 GGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTC 53539
||| | || | || || || |||||||| || || || |||||||| || || || ||
Sbjct 4410881 GGCTCCTCCAACGGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCACGTTATGTG 4410940
Query 53540 AACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCC 53599
||||||||||| |||||| || | || ||||||||||| |||||||||||||||
Sbjct 4410941 GACCAGGGTGGTAACAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGGCACGCC 4411000
Query 53600 GACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGT 53659
|| | | ||||| ||||| ||||| |||||| ||| | || ||| | ||| |||
Sbjct 4411001 GATGTCTTCGAGTTCCTCGATCTGCGCAAGAATCACGGTAAGGAGGAGGTTCGCGCTCGT 4411060
Query 53660 GACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGA 53718
||||| || ||| |||||||||| || || ||||||||| | || ||| |||
Sbjct 4411061 GACCTTTTCTAC-GCTCTGTGGACCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAACGG 4411119
Query 53719 GGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGA 53778
|| ||| || | ||||| || ||| ||| ||||| | |||||||||||| ||
Sbjct 4411120 TGACTGGACGCTCTTCTGCCCCAATGAGGCCCCTGGCCTAGCTGATGTCTACGGTGATGA 4411179
Query 53779 GTTTAACGAGATGTATCGGACGTAC--GCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAG 53836
||| | | | || | |||| |||| ||||||| | |||| |||||
Sbjct 4411180 GTTCGAGGCTCTCTACGCCAAGTACGAGCAG--GAGGGCCGTGGCCGCAAGACCATCAAG 4411237
Query 53837 GCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATG 53896
|| | || | ||| | || || ||| || |||| ||||| || | || | ||||
Sbjct 4411238 GCTCAGAAGCTCTGGTACGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCCCTTCATG 4411297
Query 53897 TGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
|||||||||| | |||| ||||||| ||||||||||||
Sbjct 4411298 CTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAAC 4411339
>seq4
Length=4347949
Score = 127 bits (140), Expect = 2e-24
Identities = 301/450 (67%), Gaps = 20/450 (4%)
Strand=Plus/Plus
Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211
|||||||| ||||| || || || || |||| ||||||||| ||||| || || ||| |
Sbjct 4153596 CCAGTTCCAATACCATCCGCGCCGTTGATCAAAATCATCGGGACGACGGGCACAAAGACC 4153655
Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGG- 117270
|| ||||| | || | || || || | ||| | || | || || ||||
Sbjct 4153656 TCGGGCTCGATCTTCTTGCCATCATCTTCGTTGTAAGTTAGTA----ATGGTTCATCGGC 4153711
Query 117271 ---ATCGAATATGTTCTTG-GTCCAC--GGTGCTAGGCGAGTGAAAATGTAACGAGAGCT 117324
|| ||| | |||| || || || | |||||||||| | |||||||||| ||
Sbjct 4153712 CATATGGAAGAC---CTTGCGTGCAAAGGGAGATAGGCGAGTGTAGATGTAACGAGCACT 4153768
Query 117325 TGCAGCATCCTTGCCACCAGC---AAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAG 117381
||| ||| ||||||| | ||| || |||| || | |||||| ||||||| |
Sbjct 4153769 GGCACAATC---GCCACCACCTTGAAGTCGACTACCAAAGTTTCCACTAGGCTCCAGGCA 4153825
Query 117382 GTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCT 117441
||| | ||||||| ||| |||||| | ||||| | | || || || || |||
Sbjct 4153826 GTTGATATTGTTGGAGCCAACAAAGGTCTGAGCAAGGCCAACGATAGTCTGCTGAAGGGA 4153885
Query 117442 CGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTT 117501
| ||||| ||||| || || ||| | | || | ||| ||||||| | | |||||
Sbjct 4153886 GACGTCACCGTGGTGGTAGGCTGTCATTCCGGATACATGGCCTGCCAGCTCAACTACCTT 4153945
Query 117502 CATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTT 117561
|||||| | ||| ||| || |||| | || |||||||||||||| |||||
Sbjct 4153946 CATGTCCTTCTTCAAGTTGCGACGGAAACAGGTGTGAAGCACCTTGCGCTGACCGGGCTT 4154005
Query 117562 CAGACCATCCGCCACGTGAGGGATCGAACG 117591
|| ||||| | ||| ||| ||||| ||
Sbjct 4154006 CAATCCATCGACAACGGAAGGAATCGAGCG 4154035
Score = 89.7 bits (98), Expect = 6e-13
Identities = 197/292 (67%), Gaps = 4/292 (1%)
Strand=Plus/Plus
Query 152026 CGCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAAC 152085
|| ||| ||||||| || | ||||| ||| |||||| || || | |||||
Sbjct 4153746 CGAGTGTAGATGTAACGAGCACTGGCACAATCGCCACCACCTTGAAGTCGACTACCAAAG 4153805
Query 152086 TGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTC 152145
| |||| ||||| ||| ||||| ||||||| ||| || || ||||||| |
Sbjct 4153806 TTTCCACTAGGCTCCAGGCAGTTGATATTGTTGGAGCCAACAAAGGTCTGAGCAAGGCCA 4153865
Query 152146 ACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTAT 152205
|| || || ||| || | ||||||||||| || || ||| |||| ||| ||
Sbjct 4153866 ACGATAGTCTGCTGAAGGGAGACGTCACCGTGGTGGTAGGCTGTCAT-TCCG-GATACAT 4153923
Query 152206 --CCCGCCAACTGCGCCACCTTCATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAA 152263
|| |||| || | |||||||||||| || ||| ||| || ||||| || ||
Sbjct 4153924 GGCCTGCCAGCTCAACTACCTTCATGTCCTTCTTCAAGTTGCGACGGAAACAGGTGTGAA 4153983
Query 152264 TCACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACG 152315
|||||||||||| || ||||| || || || ||| ||||||||| ||
Sbjct 4153984 GCACCTTGCGCTGACCGGGCTTCAATCCATCGACAACGGAAGGAATCGAGCG 4154035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215890556800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |