Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1 273 2e-68 seq3 181 1e-40 seq2 89.7 6e-13 >seq1 Length=8587311 Score = 273 bits (302), Expect = 2e-68 Identities = 806/1228 (66%), Gaps = 27/1228 (2%) Strand=Plus/Minus Query 80540 CCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACG 80599 |||||||||||| ||||| |||||||| ||| | ||||| || | | | ||||| || | Sbjct 4411799 CCCACATGTCGTACTGCAGGATGCCCTGCGAGACGGGAGAGCCAGGGTAAGTCTCATAGG 4411740 Query 80600 GGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAA 80659 | ||| | ||||||| | ||| || | | | ||| |||| || ||| ||| | Sbjct 4411739 GACCCAGCTTCTTGGCAATCTCGGCGGAAGCAGTCAAGGCACCGTGGTAGATGGTCTCGA 4411680 Query 80660 AGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGA 80719 ||| |||| | | |||| || |||||||| || | || || || Sbjct 4411679 AGATCTGGATGTTGAGTTGTCTGGCCTCGGGAGAGTCGAACGGCAGACGCAGAGCCAGGA 4411620 Query 80720 ACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCG-C 80778 | | ||||| || || | || |||| ||||| |||||||| || ||| | || | Sbjct 4411619 AAGCATCAGCAAGACCGTTGACACCGAGAGCGATGGGGCGGTGACGGAAGTT-GCTCTTC 4411561 Query 80779 TCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACA 80838 | ||||| |||| ||||| |||| |||| |||| |||||| ||| | | | Sbjct 4411560 TTCGCCTCAGGAACGGGGTAGTAGTTGATATCAATGATCTTGTTCAGATTGTGCACGAGA 4411501 Query 80839 ACCCGTGTAACATCATGAAGTTT-CTGAAAGTCGAATTGGTTCCCCT----TC-ACAAAT 80892 ||| | || || || || || | |||| | | | || | || ||| | Sbjct 4411500 ACCTGGACGACCTCGTGGAGCTTGCCGAAATCATACTCGCCTCGCGCAGAGTCGACATAG 4411441 Query 80893 GCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCAT--CTGTAAACT 80950 | || ||| || || ||||| ||||| || |||||||| |||| ||||| || Sbjct 4411440 GTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACTGTA--CT 4411383 Query 80951 CGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACT 81010 ||| || || ||||||| ||||| ||| ||||||||||| |||||||| || Sbjct 4411382 CGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCT 4411323 Query 81011 TGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGA 81070 | ||||||||| ||||||||| |||| | ||| |||| ||||| ||| | || || Sbjct 4411322 TCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGA 4411263 Query 81071 GGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACAT 81130 | ||||||| ||| | || | ||||||| ||||||| ||| || | | | Sbjct 4411262 GAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCCTCCTGCTCGT 4411203 Query 81131 ACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGT 81190 |||||||||| | ||||||| |||||| | |||| ||| | ||| ||| | Sbjct 4411202 ACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCAT 4411143 Query 81191 TAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGA 81250 | ||||| | || |||||| || | ||| || ||||||||| || ||| Sbjct 4411142 TGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGG 4411083 Query 81251 TCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCG--CCTCCTCATCACCCTGGTTGAGGCG 81308 |||| || ||| ||| ||||| || |||||| ||||||| | ||| || || ||| Sbjct 4411082 TCCACAGAGCGTAGAAAAGGTCACG--AGCGCGAACCTCCTCCTTACCGTGATTCTTGCG 4411025 Query 81309 CAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCC 81368 || ||||| || || | || || || ||||| |||||||| || | ||| | | || Sbjct 4411024 CAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACC 4410965 Query 81369 CTTGCGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACAT 81425 ||| | |||||||||| || ||||| || || |||||| ||||||| ||| Sbjct 4410964 GGGGCGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCAT 4410905 Query 81426 AGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCA- 81484 ||| | ||||| | || ||||| || || | || || || | ||||| | Sbjct 4410904 AGGAACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAAT 4410845 Query 81485 -CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTC 81543 | || |||| |||||||| ||||| | ||| || ||| ||||| || Sbjct 4410844 GCGGTGGACATTG--AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTG 4410787 Query 81544 ATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGAC 81603 | || |||||||| ||||| ||||| ||| ||| ||||| || ||| || || Sbjct 4410786 AGAGTATCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCG 4410727 Query 81604 ATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAAC 81661 | || ||| || ||| ||||||||||||| || |||| |||||| |||| || Sbjct 4410726 AGCT--GGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACT 4410669 Query 81662 GGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGA 81721 | ||||||| || || || || || | ||| || || |||||||| |||| Sbjct 4410668 TTTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGA 4410609 Query 81722 TAGCTACACGCATAAACATGTACTGGGG 81749 ||| |||||||| | || || ||| || Sbjct 4410608 CAGCAACACGCATCAGCAAGTGCTGAGG 4410581 Score = 123 bits (136), Expect = 3e-23 Identities = 138/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || || || ||||| | || | ||| Sbjct 959390 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 959449 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||| | || || |||||||||||||| ||||| || ||||| |||||||| Sbjct 959450 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCTG 959509 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593 || || || || ||||| |||||||||| || ||||| ||| ||||| || |||| || Sbjct 959510 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 959568 Query 27594 GG 27595 || Sbjct 959569 GG 959570 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097 || ||||| ||||||||||| ||||| | ||| ||||||||||| | |||||| Sbjct 4412307 GTACGCAGGTAGTACATGCCGGTCTTCAAACCCATCTTCCAGCCGGCGAAGTGCATGCTG 4412248 Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157 | ||||| | | ||||| | || || | |||||| || ||||| |||||| |||| Sbjct 4412247 GTCAGCTTGCCCATGGTGGGCTCCTTCAAGTGGATGTTGAGGGACTGCGACTGATCGATG 4412188 Query 80158 AAAGCCCCACGATCTGCCGCCAT 80180 || || || ||||| || ||||| Sbjct 4412187 AAGGCACCGCGATCGGCGGCCAT 4412165 >seq3 Length=5002383 Score = 181 bits (200), Expect = 1e-40 Identities = 169/215 (79%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 |||||||| || ||||| ||||| ||||| |||||||||||||| | |||| ||| | Sbjct 15891 GTCAAGACCCTGACCGGAAAGACCATTACCCTTGAGGTTGAGTCTAGCGATACCATCGAC 15832 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 || ||||| | || || |||||||||||||| ||||| || |||||||||||| | || Sbjct 15831 AACGTGAAGTCAAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGTTTGATC 15772 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 ||||| || ||||| || ||||| | ||||||||| | |||||||| |||| || || Sbjct 15771 TTTGCCGGCAAGCAGCTGGAGGACGGTCGTACCCTGTCTGACTATAACATCCAGAAAGAG 15712 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||| || | ||| | ||||| || ||||| Sbjct 15711 TCCACTCTACACTTGGTCCTCCGTCTCCGTGGTGG 15677 Score = 179 bits (198), Expect = 4e-40 Identities = 180/232 (78%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| | ||||| |||||||| || || ||||| ||| || | Sbjct 15447 ATGCAAATCTTTGTCAAGACTTTGACCGGAAAGACTATCACACTAGAGGTGGAG--AGCT 15390 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | || | ||| || ||||||||||||||||| |||||||| |||| Sbjct 15389 CAGACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACC 15330 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||||||||| || || ||||||||||| || ||||||| ||||| || | ||||| | Sbjct 15329 AGCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACTCTTTCGGACTACA 15270 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | |||| ||||| |||||| || || || |||||||| || ||||| || Sbjct 15269 ACATCCAGAAGGAGAGCACTCTGCACCTGGTGTTGCGTCTGCGTGGTGGCCA 15218 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || |||||||||||||| || ||||| || |||||| Sbjct 15675 ATGCAGATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTCGAGTCATCC 15616 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| ||||| | || ||||| || |||||||| ||||| || |||||| Sbjct 15615 GATACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 15556 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| || ||||| || ||||| || ||||||| ||| || || | || || || Sbjct 15555 CAACGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGCACACTTTCCGATTACAAC 15496 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||||||||| || || || ||| | ||||| || ||||| Sbjct 15495 ATCCAGAAGGAATCCACACTCCACCTTGTCCTCCGTCTACGTGGTGG 15449 Score = 163 bits (180), Expect = 3e-35 Identities = 158/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || |||||||||||||| | |||| ||| | ||| | ||| | Sbjct 16165 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAATGTCAAGTCA 16106 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || |||||||||||||| ||||| || |||||||||||| | || ||||| || ||| Sbjct 16105 AAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTTTGATCTTTGCCGGAAAG 16046 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || |||||||| | ||| || || | |||||||| |||| ||||| |||||||| ||| Sbjct 16045 CAGCTCGAGGACGGTCGCACACTGTCCGACTATAACATCCAGAAGGAGTCCACTCTCCAT 15986 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || || || || || Sbjct 15985 CTGGTCCTTCGCCTCCGTGGCGG 15963 >seq2 Length=5360957 Score = 89.7 bits (98), Expect = 6e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 ||||||||||| ||||| || ||||| || ||| | || || ||||||||||| |||||| Sbjct 1552068 GACAAGGAGGGTATTCCCCCTGACCAACAACGTTTGATCTTCGCTGGTAAGCAGCTCGAG 1552127 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | || || || | || || || |||| ||||| || || ||||| || || | Sbjct 1552128 GACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTC 1552187 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 1552188 CGCCTGCGTGGTGG 1552201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310285937920