Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq3 188 2e-42
seq1 131 4e-25
seq2 107 4e-18
>seq3
Length=5002383
Score = 188 bits (208), Expect = 2e-42
Identities = 167/209 (80%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965
|| ||||| |||||| ||| || |||||||| || |||| ||| || | ||||| |||
Sbjct 15239 ACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCATCCTCC 15298
Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025
|||||||| || ||||||||||| || || ||||||||||||| || |||||||||||
Sbjct 15299 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGA 15358
Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085
||||| || ||||| ||||||||||| ||||| || ||||| || ||||| ||||||
Sbjct 15359 ATCTTGCTCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACCTCTAGTGTGATAGTCTTT 15418
Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || | |||||| ||||| | |||||
Sbjct 15419 CCGGTCAAAGTCTTGACAAAGATTTGCAT 15447
Score = 165 bits (182), Expect = 2e-35
Identities = 159/203 (78%), Gaps = 6/203 (3%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | ||| |||||||||||||| ||||||||||| || | ||||| | || ||
Sbjct 15692 AGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGACAGGGTACGACCGTCC 15751
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||||||||||||| || ||||| | || || |||||||| |||| || |||||||||
Sbjct 15752 TCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 15811
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCTCGAGAGTGATC 211079
||||||||| |||||||| |||||||| || ||| |||||||| || || ||
Sbjct 15812 TGGATCTTTGACTTCACGTTGTCGATGGTATCGCTAGA---CTCAACCTCAAGGGTAATG 15868
Query 211080 GTCTTTCCCGTGAGAGTCTTTAC 211102
|||||||| || || ||||| ||
Sbjct 15869 GTCTTTCCGGTCAGGGTCTTGAC 15891
Score = 149 bits (164), Expect = 1e-30
Identities = 160/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||||||||| || ||||| || || |||||||| ||||| | ||| || | |||||
Sbjct 15464 AGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCC 15523
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || || ||||| || ||||| |||||||| |||| || ||||| ||
Sbjct 15524 TCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGAATGCCCTCCTTATCT 15583
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| ||||| || ||||| || || || || || || || ||||| |||
Sbjct 15584 TGAATCTTGGACTTCACATTATCGATAGTATCGGATGACTCGACTTCAAGTGTGATAGTC 15643
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || ||||| ||||| || || | ||||||
Sbjct 15644 TTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 15675
Score = 131 bits (144), Expect = 4e-25
Identities = 143/190 (75%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| || || ||||||||||| || ||||||||||| || | || || | || ||
Sbjct 15978 AGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGACAGTGTGCGACCGTCC 16037
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| |||||||| || || ||||| | || || ||||| || |||| || |||||||||
Sbjct 16038 TCGAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 16097
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||||||| || || || |||||||| || | |||||||| || ||||| |||
Sbjct 16098 TGGATCTTTGACTTGACATTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTC 16157
Query 211083 TTTCCCGTGA 211092
|| || ||||
Sbjct 16158 TTGCCAGTGA 16167
>seq1
Length=8587311
Score = 131 bits (144), Expect = 4e-25
Identities = 139/182 (76%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || ||||| | ||||| || ||||||||||| ||||||||
Sbjct 959568 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 959509
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
|| || ||||||||||| |||| || ||||||||||||||||| || ||||| |||
Sbjct 959508 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 959449
Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103
|||||||| ||| || || ||||| || || ||||| ||||| || ||||| ||
Sbjct 959448 ATGGTGTC---GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 959392
Query 211104 AA 211105
||
Sbjct 959391 AA 959390
Score = 129 bits (142), Expect = 1e-24
Identities = 196/278 (71%), Gaps = 6/278 (2%)
Strand=Plus/Minus
Query 178093 GTTCTTTTGGTTGCTCTTTCTG---CAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149
|||||| ||||| ||||| || ||| ||||| ||||| |||||||| | ||
Sbjct 4411339 GTTCTTCTGGTTACTCTTCTTGTTGCAA---GCATCCTTGTAGAGCATGAAGGGGTTACC 4411283
Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209
||||| || ||| |||||||| | ||| |||| ||| || || |||||
Sbjct 4411282 AGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTCTTGCG 4411223
Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269
| | || || | ||||||||| |||||| ||||||| || || ||||||||
Sbjct 4411222 GCCACGGCCCTCCTGCTCGTACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATC 4411163
Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329
| | || || || |||||||||||||||||||| |||| | ||||| ||| || ||
Sbjct 4411162 AGCTAGGCCAGGGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCG 4411103
Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAA 178367
||||||||||| || | |||||| | || |||||||
Sbjct 4411102 CTTCATGAAGAGATCGGGGGTCCACAGAGCGTAGAAAA 4411065
>seq2
Length=5360957
Score = 107 bits (118), Expect = 4e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|| || |||||||| || ||||| || |||||||| ||||||| ||| || | || ||
Sbjct 1552186 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCC 1552127
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| |||||||| || |||||||| | |||||||||||||| |||| || ||||||||
Sbjct 1552126 TCGAGCTGCTTACCAGCGAAGATCAAACGTTGTTGGTCAGGGGGAATACCCTCCTTGTC 1552068
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151762373840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |