Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03- 01] 16 sequences; 27,123,058 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq3 188 2e-42 seq1 131 4e-25 seq2 107 4e-18 >seq3 Length=5002383 Score = 188 bits (208), Expect = 2e-42 Identities = 167/209 (80%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || ||||| |||||| ||| || |||||||| || |||| ||| || | ||||| ||| Sbjct 15239 ACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCATCCTCC 15298 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 |||||||| || ||||||||||| || || ||||||||||||| || ||||||||||| Sbjct 15299 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGA 15358 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| || ||||| ||||||||||| ||||| || ||||| || ||||| |||||| Sbjct 15359 ATCTTGCTCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACCTCTAGTGTGATAGTCTTT 15418 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || | |||||| ||||| | ||||| Sbjct 15419 CCGGTCAAAGTCTTGACAAAGATTTGCAT 15447 Score = 165 bits (182), Expect = 2e-35 Identities = 159/203 (78%), Gaps = 6/203 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| |||||||||||||| ||||||||||| || | ||||| | || || Sbjct 15692 AGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGACAGGGTACGACCGTCC 15751 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| || ||||| | || || |||||||| |||| || ||||||||| Sbjct 15752 TCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 15811 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCTCGAGAGTGATC 211079 ||||||||| |||||||| |||||||| || ||| |||||||| || || || Sbjct 15812 TGGATCTTTGACTTCACGTTGTCGATGGTATCGCTAGA---CTCAACCTCAAGGGTAATG 15868 Query 211080 GTCTTTCCCGTGAGAGTCTTTAC 211102 |||||||| || || ||||| || Sbjct 15869 GTCTTTCCGGTCAGGGTCTTGAC 15891 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || ||||| || || |||||||| ||||| | ||| || | ||||| Sbjct 15464 AGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCC 15523 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || || ||||| || ||||| |||||||| |||| || ||||| || Sbjct 15524 TCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGAATGCCCTCCTTATCT 15583 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||||| || ||||| || || || || || || || ||||| ||| Sbjct 15584 TGAATCTTGGACTTCACATTATCGATAGTATCGGATGACTCGACTTCAAGTGTGATAGTC 15643 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 15644 TTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 15675 Score = 131 bits (144), Expect = 4e-25 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || ||||||||||| || ||||||||||| || | || || | || || Sbjct 15978 AGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGACAGTGTGCGACCGTCC 16037 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || || ||||| | || || ||||| || |||| || ||||||||| Sbjct 16038 TCGAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 16097 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || || || |||||||| || | |||||||| || ||||| ||| Sbjct 16098 TGGATCTTTGACTTGACATTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTC 16157 Query 211083 TTTCCCGTGA 211092 || || |||| Sbjct 16158 TTGCCAGTGA 16167 >seq1 Length=8587311 Score = 131 bits (144), Expect = 4e-25 Identities = 139/182 (76%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || ||||| | ||||| || ||||||||||| |||||||| Sbjct 959568 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 959509 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || ||||||||||| |||| || ||||||||||||||||| || ||||| ||| Sbjct 959508 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 959449 Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 |||||||| ||| || || ||||| || || ||||| ||||| || ||||| || Sbjct 959448 ATGGTGTC---GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 959392 Query 211104 AA 211105 || Sbjct 959391 AA 959390 Score = 129 bits (142), Expect = 1e-24 Identities = 196/278 (71%), Gaps = 6/278 (2%) Strand=Plus/Minus Query 178093 GTTCTTTTGGTTGCTCTTTCTG---CAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149 |||||| ||||| ||||| || ||| ||||| ||||| |||||||| | || Sbjct 4411339 GTTCTTCTGGTTACTCTTCTTGTTGCAA---GCATCCTTGTAGAGCATGAAGGGGTTACC 4411283 Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209 ||||| || ||| |||||||| | ||| |||| ||| || || ||||| Sbjct 4411282 AGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTCTTGCG 4411223 Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269 | | || || | ||||||||| |||||| ||||||| || || |||||||| Sbjct 4411222 GCCACGGCCCTCCTGCTCGTACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATC 4411163 Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329 | | || || || |||||||||||||||||||| |||| | ||||| ||| || || Sbjct 4411162 AGCTAGGCCAGGGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCG 4411103 Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAAAA 178367 ||||||||||| || | |||||| | || ||||||| Sbjct 4411102 CTTCATGAAGAGATCGGGGGTCCACAGAGCGTAGAAAA 4411065 >seq2 Length=5360957 Score = 107 bits (118), Expect = 4e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| || ||||| || |||||||| ||||||| ||| || | || || Sbjct 1552186 AGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCC 1552127 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || |||||||| || |||||||| | |||||||||||||| |||| || |||||||| Sbjct 1552126 TCGAGCTGCTTACCAGCGAAGATCAAACGTTGTTGGTCAGGGGGAATACCCTCCTTGTC 1552068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151762373840