Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq3 178 3e-39
seq1 152 1e-31
seq2 123 5e-23
>seq3
Length=5002383
Score = 178 bits (196), Expect = 3e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || || || | ||| ||| || ||||||||||| || |
Sbjct 15448 ACCACCACGTAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGA 15507
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| ||||| |||||||| || || || ||||||||||| | |||||| |||||| ||
Sbjct 15508 AAGTGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGG 15567
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| |||||||| ||||| ||||| | || || |||||||||| || || | |||||
Sbjct 15568 AATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTATCGGATGACTCGAC 15627
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| || ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 15628 TTCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 15675
Score = 174 bits (192), Expect = 3e-38
Identities = 179/229 (78%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||||||||| || | ||||| || | ||||| || || |||||||||||||| | |
Sbjct 15221 CCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 15280
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || ||||||||||| || || || || || ||||| | ||| || |||||| |||
Sbjct 15281 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 15340
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050
|||||||||||||| || ||| ||||| || ||| | ||||| ||||| | |||| || |
Sbjct 15341 ATACCCTCCTTGTCCTGAATC-TTGCTCTTGACGTTGTCGATGGTGTCTG-AGCTCTCCA 15398
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| || || ||||| ||||| || ||||||||||| || || || |||||
Sbjct 15399 CCTCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 15447
Score = 154 bits (170), Expect = 3e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || |||| |||| ||| ||||| |||||||| |||||||
Sbjct 15676 ACCACCACGGAGACGGAGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGA 15735
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || || ||||| || || || ||||||||||||||||| || |||||| ||
Sbjct 15736 CAGGGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGG 15795
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| |||||||||| || ||| | ||||| || || || || ||
Sbjct 15796 AATGCCCTCCTTGTCCTGGATCTTTGACTTCACGTTGTCGATGGTATCGCTAGACTCAAC 15855
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089
|| || || || ||||| || |||| ||||| ||||
Sbjct 15856 CTCAAGGGTAATGGTCTTTCCGGTCAGGGTCTTGACGA 15893
Score = 138 bits (152), Expect = 2e-27
Identities = 153/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| |||||||| |||||||| | ||| || || |||||||| ||||| |
Sbjct 15962 ACCGCCACGGAGGCGAAGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGA 16021
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||| || ||||| || || || ||||||||||||||||| || ||||| ||
Sbjct 16022 CAGTGTGCGACCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGG 16081
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| |||||||||| || || | ||||| || || | || ||
Sbjct 16082 AATGCCCTCCTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTATCGCTGGACTCAAC 16141
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
|| || ||||| ||||| || ||
Sbjct 16142 CTCAAGGGTGATGGTCTTGCCAGT 16165
>seq1
Length=8587311
Score = 152 bits (168), Expect = 1e-31
Identities = 141/179 (79%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| || |||||||||||||| || || || ||||| ||||||
Sbjct 959568 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 959509
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| ||| ||||||||| ||||| ||||||||||| |||||||| | || ||| | |||
Sbjct 959508 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 959449
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| | ||||| ||||| || || ||||||||||||| ||||| |||||
Sbjct 959448 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 959390
>seq2
Length=5360957
Score = 123 bits (136), Expect = 5e-23
Identities = 109/136 (80%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || || || || | || || || ||||||||||| || |
Sbjct 1552202 ACCACCACGCAGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 1552143
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||| ||||| || || || || || ||||||||||||||||||||| ||
Sbjct 1552142 AAGAGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGTTGGTCAGGGGG 1552083
Query 282992 AATACCCTCCTTGTCT 283007
||||||||||||||||
Sbjct 1552082 AATACCCTCCTTGTCT 1552067
Score = 91.5 bits (100), Expect = 3e-13
Identities = 152/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250
|||||||| | |||||| |||| ||| | || | |||||||| || | || |||
Sbjct 1779480 AGGAGTTCCTCACTGACGCTCTTCCCTGCGGCCTGCTTGGCATGAACGCCAAGCTGATGT 1779539
Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310
| | || || || ||||| ||||| || | | ||||| || || || |||| |
Sbjct 1779540 GCGAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACT 1779599
Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370
| ||| | | |||||||||| || |||||| ||| || | || || || ||||
Sbjct 1779600 ACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCTTGGCCGGCAAGACCAACT 1779659
Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410
||||||||||||||||| | || || || | | | |||||
Sbjct 1779660 TCTTCGAAAAGCGTGTCGGTGACTACCAGAAGGCTGGTGT 1779699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738985418464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |