Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq3 134 1e-26
seq1 93.3 3e-14
>seq3
Length=5002383
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | |||||||||||| || ||||||||||| ||||||||||| || |
Sbjct 15221 CCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 15280
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| || | || ||||||||||| || || ||||| | ||||||||| || | |||
Sbjct 15281 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 15340
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| ||| ||||| ||| ||||| ||| | | | |||||||| | | ||||||
Sbjct 15341 ATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACC 15400
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| | || || |||||||| || | ||||| || |||||||||||
Sbjct 15401 TCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 15447
Score = 116 bits (128), Expect = 3e-21
Identities = 145/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || ||| ||| || |||||||| || || | || || |||| |||
Sbjct 15695 ACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGACAGGGTACGACCGTCCTCC 15754
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||||||||||||||| || | || | || ||||| |||
Sbjct 15755 AGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGG 15814
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | ||||| ||| || || ||||| | ||||| ||||||
Sbjct 15815 ATCTTTGACTTCACGTTGTCGATGGTATCGCTAGACTCAACCTCAAGGGTAATGGTCTTT 15874
Query 44309 CCCGTGAGGGTCTTCACGA 44327
|| || |||||||| ||||
Sbjct 15875 CCGGTCAGGGTCTTGACGA 15893
Score = 111 bits (122), Expect = 1e-19
Identities = 139/189 (74%), Gaps = 4/189 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
||||| || || ||| |||||| |||||||| || |||| ||| ||| |||| ||
Sbjct 15981 ACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGACAGTGTGCGACCGTCCTCG 16040
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||||||||||||||| || | || | || ||||| |||
Sbjct 16041 AGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 16100
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | ||||| ||| ||| || ||||| | || || ||||
Sbjct 16101 ATCTTTGACTTGACATTGT--CGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCT 16158
Query 44307 TTCCCGTGA 44315
| || ||||
Sbjct 16159 TGCCAGTGA 16167
Score = 107 bits (118), Expect = 1e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| ||||| |||||||||||||||| ||| ||| | || ||
Sbjct 15467 ACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCCTCA 15526
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||| | ||| ||||| || | || | || ||||| ||
Sbjct 15527 AGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGAATGCCCTCCTTATCTTGA 15586
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | || || |||| || || || || | || || |||||
Sbjct 15587 ATCTTGGACTTCACATTATCGATAGTATCGGATGACTCGACTTCAAGTGTGATAGTCTTG 15646
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| ||||| || |||||
Sbjct 15647 CCGGTGAGTGTCTTGACGAAAATCTGCAT 15675
>seq1
Length=8587311
Score = 93.3 bits (102), Expect = 3e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| ||| || ||| | || || |||||||| ||||| ||||
Sbjct 959570 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 959511
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267
||| |||||| || || | || | || ||||| ||| ||||| ||| | |
Sbjct 959510 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 959451
Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327
| ||||||||| || || || || | ||||| ||||| ||||| |||||||| ||||
Sbjct 959450 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 959391
Query 44328 A 44328
|
Sbjct 959390 A 959390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990329801872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |