Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq1 147 2e-30
seq3 140 3e-28
seq2 96.9 3e-15
>seq1
Length=8587311
Score = 147 bits (162), Expect = 2e-30
Identities = 144/183 (79%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| |||||| |||||||| | || |||||||||||||||||||| |
Sbjct 959570 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 959511
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792
|||| ||||||||||| | ||||| || |||||||||| ||| || ||| ||| |
Sbjct 959510 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTT-GACGTTG 959452
Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851
| | |||||||||||||| || || | || || || ||||||||||| ||||| |||
Sbjct 959451 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 959392
Query 41852 AAA 41854
|||
Sbjct 959391 AAA 959389
>seq3
Length=5002383
Score = 140 bits (154), Expect = 3e-28
Identities = 155/205 (76%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
||||| || || || | |||||||| || ||| ||||||||| ||||||||||||||
Sbjct 15963 CCGCCACGGAGGCGAAGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGAC 16022
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| ||||||||||| ||||| || |||| ||||| ||||||| ||||
Sbjct 16023 AGTGTGCGACCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGGA 16082
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813
| || |||||||||| ||| ||| ||| || | || | || ||||| ||||| |
Sbjct 16083 ATGCCCTCCTTGTCCTGGATCTTTGACTTGACATTGTCG--ATGGTATCGCTGGACTCAA 16140
Query 41814 CCTCCACCGTTATCGTTTTACCCGT 41838
|||| | || || || || || ||
Sbjct 16141 CCTCAAGGGTGATGGTCTTGCCAGT 16165
Score = 138 bits (152), Expect = 1e-27
Identities = 163/218 (75%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || ||| ||| ||||| ||||||||||| ||
Sbjct 15677 CCACCACGGAGACGGAGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGAC 15736
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || |||| || |||||||||||||| || |||| ||||| ||||| | ||||
Sbjct 15737 AGGGTACGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGA 15796
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| ||| |||| ||| | | | || ||||| ||||| ||
Sbjct 15797 ATGCCCTCCTTGTCCTGGATCTTTGACTTC-ACGTTGTCGATGGTATCGCTAGACTCAAC 15855
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852
||| | || || || || || ||||| ||||| ||||
Sbjct 15856 CTCAAGGGTAATGGTCTTTCCGGTCAGGGTCTTGACGA 15893
Score = 123 bits (136), Expect = 2e-23
Identities = 171/233 (73%), Gaps = 10/233 (4%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| |||||||| ||||| |||||||||||||| ||||| ||||| ||
Sbjct 15220 GCCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGA 15279
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || || | || || |||||||| || ||||| || || ||||| ||||| | ||
Sbjct 15280 AAGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGG 15339
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTC---GCTCGAC 41809
|| | |||||||||| ||| | ||||| | ||| | | | ||||| ||| |
Sbjct 15340 AATACCCTCCTTGTCC-TGA-ATCTTGCTCTTGACGTTGTCGATGGTGTCTGAGCT---C 15394
Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||||| | || || || || || |||| ||||| || || || |||||
Sbjct 15395 TCCACCTCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 15447
Score = 109 bits (120), Expect = 5e-19
Identities = 166/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || |||||||| | || || || || ||| |||||||| ||||| || |||||
Sbjct 15449 CCACCACGTAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAA 15508
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || |||||||| ||||| || || || || || ||||| | ||||
Sbjct 15509 AGTGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGA 15568
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCA-ACGA-CGACACAGTGTCGCTCGACTCC 41812
| || |||||| || ||| | || | ||||| | | ||| | || ||| |||||
Sbjct 15569 ATGCCCTCCTTATCT-TGAATCTTGGACTTCACATTATCGATA--GTATCGGATGACTCG 15625
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || | || || || || || || || ||||| ||||||||||||||
Sbjct 15626 ACTTCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 15675
>seq2
Length=5360957
Score = 96.9 bits (106), Expect = 3e-15
Identities = 104/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
||| || || || || || | ||| || || || || ||||||||| ||||| || ||
Sbjct 1552205 ACCACCACCACGCAGGCGGAGCACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATC 1552146
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
|| || ||||| |||| ||||||||||| || ||||| |||| || |||||||| |
Sbjct 1552145 CGAAAGAGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGTTGGTCAGG 1552086
Query 41752 GGGAACGCTCTCCTTGTC 41769
||||| | |||||||||
Sbjct 1552085 GGGAATACCCTCCTTGTC 1552068
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303907539200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |