Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq927 95.1 1e-14 >seq927 Length=85386 Score = 95.1 bits (104), Expect = 1e-14 Identities = 196/289 (68%), Gaps = 7/289 (2%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || ||||||||||| || ||| |||| ||||| ||||||||||| ||||| Sbjct 51631 ATGTAGGTATCGATGAGCAGAGAGTAGGTTTCAGAGTGGATGTTCTCCATCATGATCTGG 51572 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| ||||| || | || ||||| || | ||| || || | || Sbjct 51571 AAGCCGTAGAAGCAACGGGCCTCGGGGATCTGAACCTCTCCACTGAAGCGCTCAACAAGG 51512 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATA- 17412 || ||||| || || |||||| |||||||| || || | | || | ||| || Sbjct 51511 TTCTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGAGACGAAGTAA 51452 Query 17413 --TTTTTCGTCCGGTGTAA--GAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTT 17468 | ||||| || || | | ||||||| | | ||| ||||| | ||| | | Sbjct 51451 CGCTCATCGTC--GTTCAAGCGGTTGTGCCAGTCGTGAAGATCCTTGGAAAGATCGATCT 51394 Query 17469 CTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 | |||| |||||| ||| |||| | ||||| || ||||| | ||| || Sbjct 51393 CCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTGCCAGAT 51345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517538043834240