Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq189 111 1e-19 >seq189 Length=53202 Score = 111 bits (122), Expect = 1e-19 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | || |||| || | ||||||||| || || ||||||||||| | | Sbjct 52979 CCGCCACGGAGRCGRAGGACCARRTGKAGAGTGGACTCYTTCTGGATGTTATAGTCRGAC 52920 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | ||||||| ||||| || || ||| | || | | ||||||||| ||| Sbjct 52919 AGKGTRCGACCGTCCTCSAGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCMGGGGGA 52860 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||||||| || || | | ||| ||||| | || ||| Sbjct 52859 ATGCCCTCCTTGTCCTGGATCTTTGACTTSACRTTGTCGATGGTATCGCTGGACTCAACC 52800 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 || | ||| ||||||||||| || Sbjct 52799 TCAAGGGTGATGGTCTTGCCAGT 52777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422253189140288