Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq927 201 1e-46
seq1023 123 3e-23
seq190 107 2e-18
seq189 104 2e-17
seq923 86.0 6e-12
>seq927
Length=85386
Score = 201 bits (222), Expect = 1e-46
Identities = 216/285 (76%), Gaps = 3/285 (1%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||| || |||||||||| ||||||| | || ||
Sbjct 51345 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATCGATCTT 51404
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|||||||| ||||||| | |||||||||||| | ||||| | ||| ||
Sbjct 51405 TCCAAGGATCTTCACGACTGGCACAACCGCTTGAACGACGATGAGCGTTACTTCGTCTCC 51464
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||||| || ||||| ||||||||| |||||| || ||||||||||| || || |||||
Sbjct 51465 CACGTCCTCGCCTTCTTCGCCGCCTCCGACGGTATTGTCAACGAGAACCTTGTTGAGCGC 51524
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| | ||||| ||| | ||||||| || |||||||||||||| |||||| |||
Sbjct 51525 TTCAGTGGAGAGGTTCAGATCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGATG 51584
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
|||||| | ||||| |||| || || |||||||| || |||
Sbjct 51585 GAGAACATCCACTCTGAAACCTACTCTCTGCTCATCGATACCTAC 51629
>seq1023
Length=175318
Score = 123 bits (136), Expect = 3e-23
Identities = 138/182 (76%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || ||||| || ||||| ||| |||| ||||| | | ||||| | |
Sbjct 137949 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 138008
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | ||||| |||||||| ||| | ||||| || || ||
Sbjct 138009 GACAACG-TCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCT 138067
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| ||||| ||||| || || | |||||||| | ||||||||||||||||||
Sbjct 138068 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 138127
Query 40878 GG 40879
||
Sbjct 138128 GG 138129
>seq190
Length=431
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || ||||| ||||| || ||||| | || ||||| | ||
Sbjct 64 ATGCAGATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTCGAGTCATCC 123
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | ||| || |||| || || |||||||| ||| | ||||||
Sbjct 124 GATACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 183
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| ||||||| || || || ||||| || || | ||||| || ||| ||||||
Sbjct 184 CAACGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGCACACTTTCCGATTACAAC 243
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||| |||| || || || ||
Sbjct 244 ATCCAGAAGGAATCCACACTCCACCTTGT 272
>seq189
Length=53202
Score = 104 bits (114), Expect = 2e-17
Identities = 133/188 (71%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770
|||| ||||| ||||||||| | || || || ||| ||| | | | | || | | |||
Sbjct 52775 TCACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAAYG-TSAAG 52833
Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830
||| || | ||||| |||||||| ||| | |||||||| || | |||| || ||
Sbjct 52834 TCAAAGATCCAGGACAAGGAGGGCATTCCCCCKGACCAGCAGCGTTTGATCTTTGCCGGM 52893
Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890
|| ||||| || |||| || || || ||||| ||||||||||| ||| |||| ||
Sbjct 52894 AAGCAGCTSGAGGACGGTCGYACMCTGTCYGACTATAACATCCAGAARGAGTCCACTCTM 52953
Query 40891 CATCTAGT 40898
|| | ||
Sbjct 52954 CAYYTGGT 52961
>seq923
Length=14999
Score = 86.0 bits (94), Expect = 6e-12
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| ||||| || ||| | ||||| ||||| | |||| ||| || || ||||| ||
Sbjct 11427 GACAAGGAGGGTATTCCCCCTGACCAACAACGTTTGATCTTCGCTGGTAAGCAGCTCGAG 11486
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|||| ||||| || || |||||||||||||||||| | || || || || ||| |
Sbjct 11487 GACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTGCTC 11546
Query 40903 CGCTTGAGGGGCGGCGG 40919
||| || | || || ||
Sbjct 11547 CGCCTGCGTGGTGGTGG 11563
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515211677799680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |