Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq190 111 1e-19 seq1023 107 2e-18 seq189 82.4 7e-11 >seq190 Length=431 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| ||| || || || || |||||||||||| | ||||| |||||| ||||| Sbjct 267 GTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCCTCAAGCTG 208 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 ||||| || |||||||||| ||||| || || || ||||||||||| ||| ||| || Sbjct 207 CTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGAATGCCCTCCTTATCTTGAATCTT 148 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | |||| || || | |||||| || | || | || |||||||| Sbjct 147 GGACTTCACATTATCGATAGTATCGGATGACTCGACTTCAAGTGTGATAGTCTTGCCGGT 88 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || || ||||||||||| Sbjct 87 GAGTGTCTTGACGAAAATCTGCAT 64 Score = 86.0 bits (94), Expect = 5e-12 Identities = 98/140 (70%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 118599 CCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGT 118658 || || |||| ||||| ||||| || || || || ||||||||||| ||| || Sbjct 431 CCRGCRAAGATRAGACGYTGCTGGTCAGGRGGAATACCCTCCTTGTCCTGAATCTTGCTC 372 Query 118659 TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGA 118718 || || | |||| |||||| | |||||| ||||| | || | || || ||||| | Sbjct 371 TTGACGTTGTCGATGGTGTCTGAGCTCTCCACCTCTAGTGTGATAGTCTTKCCGGTSARW 312 Query 118719 GTTTTTACAAAAATCTGCAT 118738 || || || || || ||||| Sbjct 311 GTCTTGACRAARATYTGCAT 292 >seq1023 Length=175318 Score = 107 bits (118), Expect = 2e-18 Identities = 135/182 (74%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||||||| ||||| |||||||||||| || || ||| |||| Sbjct 138127 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 138068 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTT 118668 |||||||| || || || || ||||||||||||| ||| | | || || || || | | Sbjct 138067 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGA--TCTTGGTCTTGACGTTGT 138010 Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728 ||| |||||| | |||||| |||| ||| | || || || ||||| || || || | Sbjct 138009 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 137950 Query 118729 AA 118730 || Sbjct 137949 AA 137948 >seq189 Length=53202 Score = 82.4 bits (90), Expect = 7e-11 Identities = 126/185 (68%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| || | || ||||| || || ||||| || || || || || ||||| Sbjct 52961 ACCARRTGKAGAGTGGACTCYTTCTGGATGTTATAGTCRGACAGKGTRCGACCGTCCTCS 52902 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || |||| | ||||||||| || || || |||||||||||||| Sbjct 52901 AGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCMGGGGGAATGCCCTCCTTGTCCTGG 52842 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||| || || | |||| ||| || || ||| ||||| | ||| | || ||| Sbjct 52841 ATCTTTGACTTSACRTTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTG 52782 Query 118710 CCGGT 118714 || || Sbjct 52781 CCAGT 52777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433824224424256