Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq189 98.7 6e-16
seq190 95.1 8e-15
>seq189
Length=53202
Score = 98.7 bits (108), Expect = 6e-16
Identities = 141/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || || | || |||| || | ||| || ||||| ||||| ||||| |||
Sbjct 52979 CCGCCACGGAGRCGRAGGACCARRTGKAGAGTGGACTCYTTCTGGATGTTATAGTCRGAC 52920
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | |||||| || || || || | ||||||||||| |||
Sbjct 52919 AGKGTRCGACCGTCCTCSAGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCMGGGGGA 52860
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| |||||| ||| | | | | || | |||| | || || ||
Sbjct 52859 ATGCCCTCCTTGTCCTGGATCTTTGACTTSACRTTGTCGATGGTATCGCTGGACTCAACC 52800
Query 34343 TCCACCGTGATGGTTTTGCCGGTGA 34367
|| | |||||||| ||||| ||||
Sbjct 52799 TCAAGGGTGATGGTCTTGCCAGTGA 52775
>seq190
Length=431
Score = 95.1 bits (104), Expect = 8e-15
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| ||||| |||||||| ||||| || || | || || | |||||| || || ||
Sbjct 255 TTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCCTCAAGCTGCTTTCCGGCAAA 196
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317
||||| || |||||||| ||| | || |||||| || ||||| ||| | ||
Sbjct 195 GATGAGACGTTGCTGGTCAGGGGGAATGCCCTCCTTATCTTGAATCTTGGACTTCACATT 136
Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377
| || | ||||| || ||||| || | ||||| || ||||||||||| || || ||
Sbjct 135 ATCGATAGTATCGGATGACTCGACTTCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGAC 76
Query 34378 AAAGATCTGCAT 34389
|| ||||||||
Sbjct 75 GAAAATCTGCAT 64
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323067401070080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |