Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1057 113 1e-19 seq721 93.3 9e-14 >seq1057 Length=118734 Score = 113 bits (124), Expect = 1e-19 Identities = 134/180 (74%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261 ||||| || |||||| || | ||||| |||||||| |||| ||||||| ||||| ||| Sbjct 4613 TGTCCACCATTCAAGATCATCATCCTCGACGAGGCAGACAGCATGACGCAAGACGCACAG 4554 Query 254262 TCCGCCCTCCGCCGAACGATGGAGAC--GCACTCCGTTGTGACGCGTTTTTGCCTGGTGT 254319 ||||| | ||||| ||||||||||| || || | | || ||||| || || || | Sbjct 4553 TCCGCTTTGCGCCGCACGATGGAGACATACAGTCGG--ATCACACGTTTCTGTCTTGTCT 4496 Query 254320 GCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 |||||||||| || ||||||| ||||| || ||| ||| |||||| || |||| Sbjct 4495 GCAACTACGTCACGCGCATCATCGAGCCGCTCGCCAGTCGTTGCAGCAAGTTCCGGTTCA 4436 >seq721 Length=8534 Score = 93.3 bits (102), Expect = 9e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336 || ||||| || |||| ||||||||||||| | || |||||||| || || ||| Sbjct 5241 TTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTTCCTCGATCTGCGCAAG 5300 Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396 || |||| || ||| | | || |||||||| ||||||| |||||| | |||| Sbjct 5301 AATCACGGTAAGGAGGAGGTTCGCGCTCGTGACCTTTTCTACGCTCTGTGGACCCCCGAT 5360 Query 249397 TTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437 | |||||| |||||| ||||| |||| || |||||||| Sbjct 5361 CTCTTCATGAAGCGCGTCGAGGCCAACGGTGACTGGACGCT 5401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073750331085824