Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq1057 113 1e-19
seq721 93.3 9e-14
>seq1057
Length=118734
Score = 113 bits (124), Expect = 1e-19
Identities = 134/180 (74%), Gaps = 4/180 (2%)
Strand=Plus/Minus
Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261
||||| || |||||| || | ||||| |||||||| |||| ||||||| ||||| |||
Sbjct 4613 TGTCCACCATTCAAGATCATCATCCTCGACGAGGCAGACAGCATGACGCAAGACGCACAG 4554
Query 254262 TCCGCCCTCCGCCGAACGATGGAGAC--GCACTCCGTTGTGACGCGTTTTTGCCTGGTGT 254319
||||| | ||||| ||||||||||| || || | | || ||||| || || || |
Sbjct 4553 TCCGCTTTGCGCCGCACGATGGAGACATACAGTCGG--ATCACACGTTTCTGTCTTGTCT 4496
Query 254320 GCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
|||||||||| || ||||||| ||||| || ||| ||| |||||| || ||||
Sbjct 4495 GCAACTACGTCACGCGCATCATCGAGCCGCTCGCCAGTCGTTGCAGCAAGTTCCGGTTCA 4436
>seq721
Length=8534
Score = 93.3 bits (102), Expect = 9e-14
Identities = 117/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336
|| ||||| || |||| ||||||||||||| | || |||||||| || || |||
Sbjct 5241 TTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTTCCTCGATCTGCGCAAG 5300
Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396
|| |||| || ||| | | || |||||||| ||||||| |||||| | ||||
Sbjct 5301 AATCACGGTAAGGAGGAGGTTCGCGCTCGTGACCTTTTCTACGCTCTGTGGACCCCCGAT 5360
Query 249397 TTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437
| |||||| |||||| ||||| |||| || ||||||||
Sbjct 5361 CTCTTCATGAAGCGCGTCGAGGCCAACGGTGACTGGACGCT 5401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073750331085824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |