Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq721 163 4e-35 seq927 107 3e-18 >seq721 Length=8534 Score = 163 bits (180), Expect = 4e-35 Identities = 731/1144 (64%), Gaps = 18/1144 (2%) Strand=Plus/Minus Query 65741 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 65800 ||| ||||| || ||||| || ||||||| || || | || ||||||||||| Sbjct 5696 AGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACTGTACTCGATAATCTCAGTGCA 5637 Query 65801 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 65860 || ||| | || || || | || | || |||||||| ||||| || ||||| Sbjct 5636 CAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATC 5577 Query 65861 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 65920 ||| || || ||||| || ||||||| ||| |||| | || | ||| || | ||||| Sbjct 5576 CTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAGA- 5518 Query 65921 GACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT--TCGTA--TAGTGTATAC 65975 | || ||||||| || | || | | ||| | ||||| | | ||| | Sbjct 5517 GCTTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCCTGCTCGTACTTGGCGTAGAG 5460 Query 65976 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATC 66035 | | |||||||| || || | |||| | | ||||| |||| || || | Sbjct 5459 AGCC--TCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGGGGCAGAAG 5402 Query 66036 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC- 66094 | || ||| || |||| ||| || || ||||| |||||||| || |||| ||||| Sbjct 5401 AGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCCACAGAGCG 5342 Query 66095 TATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 66154 || ||| | || | | | | ||||| || || |||||| ||||||||||| Sbjct 5341 TAGAAA-AGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGATCGAGGAA 5283 Query 66155 CGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 66214 | | | | ||| |||||||| |||| ||| ||||| | | || || || ||||| Sbjct 5282 CTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGGCGCTTGTT 5223 Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274 || ||||| || | || | |||||||| ||| | || | || ||| |||| |||||| Sbjct 5222 ACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACC 5163 Query 66275 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATT 66332 ||||| | || ||||| || | || || || | || ||||| | ||| Sbjct 5162 GTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATT 5103 Query 66333 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 66392 | ||||| || || || || | || ||||| | || || || | |||||||| Sbjct 5102 G--AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAA 5045 Query 66393 ATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 66452 || ||||| || || || | ||| || || || || || | | ||| | | Sbjct 5044 ATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCGAGCTGGGGTTGG 4985 Query 66453 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 66512 ||| | ||||| || | || || || ||||| || || | |||| || | | Sbjct 4984 GGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGGGACATCAAG 4925 Query 66513 TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 66572 | ||| |||||||| || || || ||| |||||||| || || |||||||| Sbjct 4924 TGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACAGCAACACGCATC 4865 Query 66573 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 66632 | || ||||||||| | ||| | | ||| ||| || | | ||| || || Sbjct 4864 AGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATCCGAAGAAGGTATGACCGCTCG 4805 Query 66633 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 66692 | || ||||| || || |||||||| ||||| || ||||| | |||| |||||||| Sbjct 4804 AGGGTCTTAAATCCGAAGTAGTTGTAGTTGAAGTCACGGTCGTACACAATAGCCGAGTTG 4745 Query 66693 AGTTTATCCTTATATTTGTTAACTACATCCATGGTAAT-ACTTGAAATAATCGGAGAATG 66751 || | || || || |||| | | | | || | | ||| || || |||| | Sbjct 4744 AGCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTCATCTGAGATCATAGGAGCGGG 4686 Query 66752 TTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 66811 || ||||| || |||||||| | | | | ||| || || ||| | || Sbjct 4685 CTTATTGTTTTTGGGGTTGACATAATGGTAGAGATCGGAGATGACCATGGAGAATTGCTT 4626 Query 66812 ttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGG 66871 |||||||| ||||| || || || ||||| || | || || | |||||| || || || Sbjct 4625 TTTTGTTTGCTTGTGGAGGTTGGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCGGG 4566 Query 66872 ATGT 66875 ||| Sbjct 4565 GTGT 4562 >seq927 Length=85386 Score = 107 bits (118), Expect = 3e-18 Identities = 116/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| || ||| || || || ||| |||||||| || | || || |||||||| Sbjct 51966 AACAGCAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAG 51907 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 || ||||| || ||||||||||||||||| || ||||| || ||||| || ||||| || Sbjct 51906 AAAGTGAGACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCG 51847 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 36302 || ||||| || || || || || || ||||||| Sbjct 51846 GAGAAGAAGATACCCTCCACAGCGGCGAAGGCAA 51813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658163190677120