Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq721 176 6e-39 seq927 111 2e-19 >seq721 Length=8534 Score = 176 bits (194), Expect = 6e-39 Identities = 740/1153 (64%), Gaps = 24/1153 (2%) Strand=Plus/Minus Query 71697 GGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCA---TATTGTATAAT 71753 ||| | ||| ||||| || ||||| || ||||||| || || | || | ||||| Sbjct 5702 GGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGG---GGTACTGTACTCGATAAT 5646 Query 71754 TTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 71813 |||||||| || ||| | || || || | || | || |||||||| ||||| Sbjct 5645 CTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTT 5586 Query 71814 ACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 71873 || |||||||| || || || || || ||||||| ||| |||| | || | ||| || Sbjct 5585 GCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGC 5526 Query 71874 TTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTCTCTT--TCGTATT- 71929 | ||||| | || ||||||| || | || | | | ||| | ||||| | Sbjct 5525 GTACCAGA-GCTTCTGAGCCTTGATGGTCTTGCGGC--CACGGCCCTCCTGCTCGTACTT 5469 Query 71930 -GTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTC 71988 | ||| | | | |||||||| || || | ||| ||| ||||| ||||| Sbjct 5468 GGCGTAGAGAGCC--TCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTG 5411 Query 71989 GGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATC 72048 || || | | | ||| || || | | | || || ||||| |||||||| || || Sbjct 5410 GGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTC 5351 Query 72049 CAAAGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAG 72107 || ||||| || ||| || || | | | | |||||| || || |||||| || Sbjct 5350 CACAGAGCGTAGAAA-AGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAG 5292 Query 72108 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGG 72167 |||||||||| | | | ||| | |||||||| |||| ||| ||||| | | || || Sbjct 5291 ATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGG 5232 Query 72168 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 72227 || ||||| || ||||| || | || | |||||||| ||| | || | || ||| || Sbjct 5231 GCGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGG 5172 Query 72228 AATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--A 72285 || |||||| ||||| | || ||||| || | || || || | || ||||| Sbjct 5171 AACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAATGCG 5112 Query 72286 TTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 72345 || |||| ||||| || || || || | || ||||| | || || || | Sbjct 5111 GTGGACATTG--AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGA 5054 Query 72346 GTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATT 72405 |||||||| || ||||| || || || | ||| || || || || || | | Sbjct 5053 GTATCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCGAGC 4994 Query 72406 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 72465 ||| | | ||| | ||||| || | || || || ||||| || || | |||| Sbjct 4993 TGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGG 4934 Query 72466 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCG 72525 |||| | | ||| |||||||| || || || ||| || ||||| || || Sbjct 4933 GACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACAGCA 4874 Query 72526 ACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAG 72585 |||||||| | || |||||||| | ||| | | ||| || || | | ||| Sbjct 4873 ACACGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATCCGAAGAAGGTAT 4814 Query 72586 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATA 72645 || || | || ||||| || || |||||||| ||||| || ||||| | |||| Sbjct 4813 GACCGCTCGAGGGTCTTAAATCCGAAGTAGTTGTAGTTGAAGTCACGGTCGTACACAATA 4754 Query 72646 ACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGAT-ACTTGAAATAAT 72704 |||| ||||| | || || || |||| || | | | ||| | | ||| || || Sbjct 4753 GCCGAGTTGAGCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTCATCTGAGATCAT 4695 Query 72705 CGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACT 72764 |||| | || ||||| || || ||||| | | | | ||| || || Sbjct 4694 AGGAGCGGGCTTATTGTTTTTGGGGTTGACATAATGGTAGAGATCGGAGATGACCATGGA 4635 Query 72765 AAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGC 72824 ||| | |||||||||| |||||| || || || ||||| || | || || |||||||| Sbjct 4634 GAATTGCTTTTTTGTTTGCTTGTGGAGGTTGGAAACGGCGATACGTGCAGCCAGAATGGC 4575 Query 72825 ATAATCTGGATGT 72837 || || || ||| Sbjct 4574 GTAGTCGGGGTGT 4562 >seq927 Length=85386 Score = 111 bits (122), Expect = 2e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| || ||| || || || ||| ||||||||||| | || || |||||||| Sbjct 51966 AACAGCAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAG 51907 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || ||||| || ||||||||||||||||| || ||||| || || || || ||||| || Sbjct 51906 AAAGTGAGACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCG 51847 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAA 42209 || |||||||| || || || || || ||||||| Sbjct 51846 GAGAAGAAGATACCCTCCACAGCGGCGAAGGCAA 51813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671129401367680