Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq144 174 2e-39 seq96 174 2e-39 >seq144 Length=113009 Score = 174 bits (192), Expect = 2e-39 Identities = 190/250 (76%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| | | || || ||||| || |||||||||||||| ||||| Sbjct 111362 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATTCAGGGAATCACCAAGCCCGCTAT 111420 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| || ||||||||||| ||||||||| |||| | || |||| || |||| Sbjct 111421 CCGTCGTCTCGCACGTCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAGGAGAC 111480 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | |||| ||||||| || || |||| ||| ||| || ||| || || Sbjct 111481 CCGCGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTCACCTACACTGA 111540 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| || | || | ||||| || | || || || || Sbjct 111541 GCACGCCAAGCGCAAGACTGTCACTTCTCTTGACGTTGTCTACGCTCTCAAGCGCCAGGG 111600 Query 16672 CCGTAAGATT 16681 ||||||| || Sbjct 111601 CCGTAAGTTT 111610 >seq96 Length=77743 Score = 174 bits (192), Expect = 2e-39 Identities = 201/268 (75%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || |||| ||||| | || || |||||||| |||||||||||||| || | Sbjct 74254 CGCCAAGCGCCACCGCAAGATCT-TGCGCGACAACATCCAGGGAATCACCAAGCCCGCCA 74196 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| || || ||||| || ||||||||| |||| | || |||| || |||| Sbjct 74195 TCCGCCGTCTCGCCCGCCGTGGCGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 74136 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | || | ||| |||| | || |||| |||| ||||||| || ||| |||| Sbjct 74135 CCCGCGGCGTGCTCAAGTCCTTCTTGGAGTCCGTCATCCGTGATGCTGTCACCTACACCG 74076 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 |||||||||| ||||||||||| || || | || | |||||||| | || || |||| Sbjct 74075 AGCACGCTAAGCGTAAGACTGTTACTTCGCTTGACGTTGTCTATGCTCTTAAGCGCCAAG 74016 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTA 16698 |||||| |||| || || || |||| Sbjct 74015 GCCGTACTCTTTACGGATTCGGTGGTTA 73988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074132089424