Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq144 174 2e-39
seq96 174 2e-39
>seq144
Length=113009
Score = 174 bits (192), Expect = 2e-39
Identities = 190/250 (76%), Gaps = 2/250 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| | | || || ||||| || |||||||||||||| |||||
Sbjct 111362 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATTCAGGGAATCACCAAGCCCGCTAT 111420
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||||||||| || ||||||||||| ||||||||| |||| | || |||| || ||||
Sbjct 111421 CCGTCGTCTCGCACGTCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAGGAGAC 111480
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| | ||| | |||| ||||||| || || |||| ||| ||| || ||| || ||
Sbjct 111481 CCGCGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTCACCTACACTGA 111540
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||||||||| || | || | ||||| || | || || || ||
Sbjct 111541 GCACGCCAAGCGCAAGACTGTCACTTCTCTTGACGTTGTCTACGCTCTCAAGCGCCAGGG 111600
Query 16672 CCGTAAGATT 16681
||||||| ||
Sbjct 111601 CCGTAAGTTT 111610
>seq96
Length=77743
Score = 174 bits (192), Expect = 2e-39
Identities = 201/268 (75%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| ||||| || |||| ||||| | || || |||||||| |||||||||||||| || |
Sbjct 74254 CGCCAAGCGCCACCGCAAGATCT-TGCGCGACAACATCCAGGGAATCACCAAGCCCGCCA 74196
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| || || ||||| || ||||||||| |||| | || |||| || ||||
Sbjct 74195 TCCGCCGTCTCGCCCGCCGTGGCGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 74136
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | || | ||| |||| | || |||| |||| ||||||| || ||| ||||
Sbjct 74135 CCCGCGGCGTGCTCAAGTCCTTCTTGGAGTCCGTCATCCGTGATGCTGTCACCTACACCG 74076
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
|||||||||| ||||||||||| || || | || | |||||||| | || || ||||
Sbjct 74075 AGCACGCTAAGCGTAAGACTGTTACTTCGCTTGACGTTGTCTATGCTCTTAAGCGCCAAG 74016
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTA 16698
|||||| |||| || || || ||||
Sbjct 74015 GCCGTACTCTTTACGGATTCGGTGGTTA 73988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074132089424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |