Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq721 237 4e-57
>seq721
Length=8534
Score = 237 bits (262), Expect = 4e-57
Identities = 618/928 (67%), Gaps = 16/928 (2%)
Strand=Plus/Plus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450
||||||| |||||| | ||| || ||||| ||| || || || || ||| |||
Sbjct 4788 TTCGGATTTAAGACCCTCGAGCGGTCATACCTTCTTCGGATTAACGGCAATGTTGCTGAG 4847
Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510
|| || ||||| || | |||||||||||| | || || || || ||| ||||
Sbjct 4848 CGTCCTCAGCACTTGCTGATGCGTGTTGCTGTCGGAATTCACGGCGAGGACATTGAGAAG 4907
Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGCTCGT-GTA-TTCACGCACGCCACGCCAACAA 363568
|| ||||| ||||| | ||| | || | ||| ||||| |||||| | || ||
Sbjct 4908 GCCATTGAGACATACCA-CTTG-ATGTCCCAAAAGTACTTCACTCACGCCTCCCCCACTC 4965
Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628
||| |||||| | |||| | || ||| | | |||||||| || | | ||| |
Sbjct 4966 TGTTCAATGCCGCTACTCCCCAACCCCAGCTCGCATCTTGCTTCCTGGTTGACGTGAGCG 5025
Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688
|| ||| |||||||| | ||| || || |||| ||||| | || ||||||| |
Sbjct 5026 CAGACAGCATTGAGGGTATTTATGATACTCTCAAGACCTGTGCCATGATCTCCAAGACCG 5085
Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747
| || || || ||| | ||||| |||| || || | ||||||| ||
Sbjct 5086 CTGGTGGTATCGGTCTCAATGTCCACCGCATTCGCGCTACCGGTTC-TTACATTGCTGGA 5144
Query 363748 ACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGG 363807
|| || | ||| || || | ||||| ||||| ||||||||| |||| || || |
Sbjct 5145 ACCAACGGCTCCTCCAACGGTATTGTTCCTATGCTGCGTGTGTTTAACAACACCGCACGT 5204
Query 363808 TACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCAT 363867
|| || ||||||||||| |||||| || || ||||| || || || |||||
Sbjct 5205 TATGTGGACCAGGGTGGTAACAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGG 5264
Query 363868 CATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AAACACGGGAAAAGAGGAATTGCG 363926
|| |||||| | || ||||| || || || || || || ||| || || ||||| | ||
Sbjct 5265 CACGCCGATGTCTTCGAGTTCCTCGATCTGCGCAAGAATCAC-GGTAAGGAGGAGGTTCG 5323
Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGC 363986
|| ||||| || ||||| || || ||| | || | || ||||||||||| |||||
Sbjct 5324 CGCTCGTGACCTTTTCTACGCTCTGTGGACCCCCGATCTCTTCATGAAGCGCGTCGAGGC 5383
Query 363987 ---AGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043
||| | ||| | ||||| ||||| | || || || || | ||||| |
Sbjct 5384 CAACGGT---GACTGGACGCTCTTCTGCCCCAATGAGGCCCCTGGCCTAGCTGATGTCTA 5440
Query 364044 GGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGAC 364103
||||| || | | ||||| |||| ||||| || |||||| | || |||||
Sbjct 5441 CGGTGATGAGTTCGAGGCTCTCTACGCCAAGTACGAGCAGGAGGGCCGTGGCCGCAAGAC 5500
Query 364104 AATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACC 364163
|| || |||||||| |||| ||||| | || | |||| |||||| || | ||
Sbjct 5501 CATCAAGGCTCAGAAGCTCTGGTACGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCC 5560
Query 364164 CTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAAT 364223
|| ||| | ||||| ||| | |||||| ||| |||||| || |||| ||||| ||
Sbjct 5561 CTTCATGCTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTAT 5620
Query 364224 TCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282
|| |||| | ||||| || || |||||||| || |||| | || || ||| || |
Sbjct 5621 TC-GCAGCTCTAACCTGTGCACTGAGATTATCGAGTACAGTACCCCTGATGAGGTGGCTG 5679
Query 364283 TATGTAACCTTGCGTCGATCGCGCTTCC 364310
| || ||||| || || |||| || ||
Sbjct 5680 TTTGCAACCTGGCTTCTCTCGCCCTCCC 5707
Score = 116 bits (128), Expect = 1e-20
Identities = 272/408 (67%), Gaps = 2/408 (0%)
Strand=Plus/Plus
Query 364750 GCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCG 364809
|| |||||||| || || ||| || || || || ||| ||||||||||| ||
Sbjct 6153 GCCCCCATGCCTACTGCCAGTACCAGTCAAATTCTGGGCTTCAATGAGTGCTTCGAGCCT 6212
Query 364810 TTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAG 364869
| || || | || || ||||| ||||| | || || || | | | || ||
Sbjct 6213 TACACCTCGAACATCTACTCCCGCCGTGTTCTGGCTGGTGAGTTCCAGATCGTCAACCCT 6272
Query 364870 TACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATC 364929
| || | |||||||| ||||| ||| |||||| |||| |||||||||| ||||
Sbjct 6273 TGGCTCCTGAAGGATCTGGTCGACCTCGGCCTGTGGTCCGACAACATGAAGAACCGTATC 6332
Query 364930 ATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATT 364989
||||||| | || || || |||||||| || | || | ||| | ||| | |
Sbjct 6333 ATCGCCGATGGCGGCTCCGTCCAGAACATCCCTAACATCCCCGCCGATATCAAGGCCCTG 6392
Query 364990 TACAAAACCGTATGGGAAATTTCCATGCG-AACTCTCATTGATATGGCGGCCGATCGCGG 365048
||||| ||||| ||||| || ||| ||| ||| || | | ||||| |||||||||||
Sbjct 6393 TACAAGACCGTTTGGGAGATCTCCCAGCGCAACATTC-TACAGATGGCCGCCGATCGCGG 6451
Query 365049 TGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAA 365108
||| || ||| |||| ||||| | ||| | | ||| |||| ||| | |||
Sbjct 6452 TGCCTTCATCGATCAGTCGCAGTCCCTCAACATCCACTTGAAGGAGCCCACCATGGGCAA 6511
Query 365109 GCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
||| || |||||| ||| ||| ||||| ||| | ||||| ||
Sbjct 6512 GCTGACCAGCATGCACTTCGCCGGCTGGAAGATGGGTTTGAAGACCGG 6559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303334095313376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |