Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq102 116 2e-21 >seq102 Length=101736 Score = 116 bits (128), Expect = 2e-21 Identities = 205/297 (69%), Gaps = 4/297 (1%) Strand=Plus/Plus Query 6193 CGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGG 6250 |||| | ||||| |||||||| ||| | | || | || || |||||||| ||||| Sbjct 30128 CGGATCCCTTCTATCGCTACAAGATG--GAAAAGCTCCAGGCTAAAGTCGAGGGCAAGGG 30185 Query 6251 AAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCC 6310 ||||||||||| ||||| | |||||| || ||||| || | ||| | || || Sbjct 30186 CAACGGTATTAAGACCGTTGTCGTCAACTTGAACTCGGTCGCCCAGTCTCTCAGTCGGCC 30245 Query 6311 TGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCA 6370 | | |||| | | || || ||||||| |||||||| || ||| | | | | | Sbjct 30246 TCCTGCCTATCTCATCAAGTACTTCGGGTTTGAACTTGGTGCCCAGGCCAACGCTAAGCC 30305 Query 6371 CAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACT 6430 | ||||||| | ||| | ||||| || || | | ||||||| ||||||| || Sbjct 30306 CTCCGACGAGCGTTGGATCATCAACGGTTCTCACGATGCCCCCAAGCTCCAGGACTACCT 30365 Query 6431 TGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 ||||||||| || |||||||||||| || | | ||| | ||||| |||||||| Sbjct 30366 TGACGGCTTCATCTCCAAGTTTGTGCTATGCAAGAAGTGCAAGAACCCTGAGACCGA 30422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334942432026608