Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq721 187 3e-42
seq927 107 2e-18
>seq721
Length=8534
Score = 187 bits (206), Expect = 3e-42
Identities = 736/1144 (64%), Gaps = 18/1144 (2%)
Strand=Plus/Minus
Query 62752 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 62811
||| ||||| || ||||| || ||||||| || || | || |||||||||||
Sbjct 5696 AGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACTGTACTCGATAATCTCAGTGCA 5637
Query 62812 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 62871
|| ||| | || || || | || | || |||||||| ||||| || |||||
Sbjct 5636 CAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATC 5577
Query 62872 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 62931
||| || || ||||| || ||||||| ||| |||| | || | ||| || | |||||
Sbjct 5576 CTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAGA- 5518
Query 62932 GACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT--TCGTA--TAGTGTATAC 62986
| || ||||||| || | || | | ||| | ||||| | | ||| |
Sbjct 5517 GCTTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCCTGCTCGTACTTGGCGTAGAG 5460
Query 62987 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATC 63046
| | |||||||| || || | |||| | || ||||| |||| || || |
Sbjct 5459 AGCC--TCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGGGGCAGAAG 5402
Query 63047 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC- 63105
| || ||| || |||| ||| || || ||||| |||||||| || |||| |||||
Sbjct 5401 AGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCCACAGAGCG 5342
Query 63106 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63165
|| ||| || || | | | | ||||| || || |||||| |||||||||||
Sbjct 5341 TAGAAA-AGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGATCGAGGAA 5283
Query 63166 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63225
| | | | ||| | |||||||| |||| ||| ||||| | | || || || |||||
Sbjct 5282 CTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGGCGCTTGTT 5223
Query 63226 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63285
|| ||||| || | || | |||||||| ||| | || | || ||| |||| ||||||
Sbjct 5222 ACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACC 5163
Query 63286 ATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATT 63343
||||| | || ||||| || | || || || | || ||||| | |||
Sbjct 5162 GTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATT 5103
Query 63344 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 63403
| ||||| || || || || | || ||||| | || || || | ||||||||
Sbjct 5102 G--AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAA 5045
Query 63404 ATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 63463
|| ||||| || || || | ||| || || || || || | | ||| | |
Sbjct 5044 ATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCGAGCTGGGGTTGG 4985
Query 63464 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGA 63523
||| | ||||| || | || || || |||||||| || | |||| || | |
Sbjct 4984 GGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGGGACATCAAG 4925
Query 63524 TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 63583
| ||| |||||||| || || || ||| |||||||| || || ||||||||
Sbjct 4924 TGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACAGCAACACGCATC 4865
Query 63584 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63643
| || ||||||||| | ||| | | ||| ||| || | | ||| || ||
Sbjct 4864 AGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATCCGAAGAAGGTATGACCGCTCG 4805
Query 63644 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 63703
| || ||||| || || |||||||| ||||| || ||||| | |||| ||||||||
Sbjct 4804 AGGGTCTTAAATCCGAAGTAGTTGTAGTTGAAGTCACGGTCGTACACAATAGCCGAGTTG 4745
Query 63704 AGTTTATCCTTATATTTGTTAACTACATCCATGGTAAT-ACTTGAAATAATAGGAAAATG 63762
|| | || || || |||| | | | | || | | ||| || |||||| |
Sbjct 4744 AGCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTCATCTGAGATCATAGGAGCGGG 4686
Query 63763 TTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 63822
|| ||||| || |||||||| | | | | ||| || || ||| | ||
Sbjct 4685 CTTATTGTTTTTGGGGTTGACATAATGGTAGAGATCGGAGATGACCATGGAGAATTGCTT 4626
Query 63823 ttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGG 63882
|||||||| ||||| || || || ||||| || | || || |||||||| || || ||
Sbjct 4625 TTTTGTTTGCTTGTGGAGGTTGGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCGGG 4566
Query 63883 ATGT 63886
|||
Sbjct 4565 GTGT 4562
>seq927
Length=85386
Score = 107 bits (118), Expect = 2e-18
Identities = 116/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711
|||| || ||| || || || ||| |||||||| || | || || ||||||||
Sbjct 51966 AACAGCAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAG 51907
Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771
|| ||||| || ||||||||||||||||| || ||||| || ||||| || ||||| ||
Sbjct 51906 AAAGTGAGACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCG 51847
Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 32805
|| ||||| || || || || || || |||||||
Sbjct 51846 GAGAAGAAGATACCCTCCACAGCGGCGAAGGCAA 51813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633622748972800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |