Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq190 131 1e-25
seq189 95.1 1e-14
seq1023 91.5 1e-13
seq923 84.2 2e-11
>seq190
Length=431
Score = 131 bits (144), Expect = 1e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || || | ||||| || || |||| |||||||| || | ||
Sbjct 64 ATGCAGATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTCGAGTCATCC 123
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | || || |||||||| |||||||| ||||| || || ||
Sbjct 124 GATACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 183
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || |||||||| || ||| | |||||| ||||| | ||||||||||||
Sbjct 184 CAACGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGCACACTTTCCGATTACAAC 243
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || ||||||||
Sbjct 244 ATCCAGAAGGAATCCAC 260
Score = 89.7 bits (98), Expect = 4e-13
Identities = 100/140 (71%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||| || || |||| || || ||||| | | |
Sbjct 292 ATGCARATYTTYGTCAAGACWYTSACCGGMAAGACTATCACACTAGAGGTGGAGAGCTCA 351
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || ||||| ||||||||||||||||| || || ||
Sbjct 352 GACACCATCGACAACGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCYCCTGACCAG 411
Query 22339 CAACGTCTTATATTTGCCGG 22358
|| ||||| || || || ||
Sbjct 412 CARCGTCTYATCTTYGCYGG 431
>seq189
Length=53202
Score = 95.1 bits (104), Expect = 1e-14
Identities = 122/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| ||||| || || ||| ||||||| | ||| | | || |
Sbjct 52777 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAAYGTSAAGTCA 52836
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||| ||||| || || || || ||| | || |||||||| ||
Sbjct 52837 AAGATCCAGGACAAGGAGGGCATTCCCCCKGACCAGCAGCGTTTGATCTTTGCCGGMAAG 52896
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | ||||| || || | || || || ||||| || || || |||||
Sbjct 52897 CAGCTSGAGGACGGTCGYACMCTGTCYGACTATAACATCCAGAARGAGTCCAC 52949
>seq1023
Length=175318
Score = 91.5 bits (100), Expect = 1e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || | || ||||| || | || || || || || | | ||| ||| |
Sbjct 137948 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCAT 138007
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| | |||| || || || ||||||||||| ||||| || || ||||| |||||
Sbjct 138008 CGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCT 138067
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| || |||||||| ||| | |||||| ||||||| | ||| |||||||| || ||
Sbjct 138068 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 138127
>seq923
Length=14999
Score = 84.2 bits (92), Expect = 2e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370
|||||||||||||||||| || || ||||||||| | || || || || || ||| | ||
Sbjct 11426 AGACAAGGAGGGTATTCCCCCTGACCAACAACGTTTGATCTTCGCTGGTAAGCAGCTCGA 11485
Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416
||| |||||| | || ||||||||||| || || || || |||
Sbjct 11486 GGACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACC 11531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419722025171920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |