Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq190 167 4e-36 seq927 159 6e-34 seq1023 138 2e-27 seq189 132 9e-26 >seq190 Length=431 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||||| || || |||||||| |||||||| Sbjct 290 CCACCACGKAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAA 231 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | ||||| || | |||||| ||||| || ||||| | ||| ||||| || ||| Sbjct 230 AGTGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGA 171 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||| ||||||||||| | ||| || ||||| || || | ||| || ||| Sbjct 170 ATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTATCGGATGACTCGACT 111 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || || ||||| ||||||||||| |||||||| Sbjct 110 TCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCAT 64 Score = 93.3 bits (102), Expect = 8e-14 Identities = 101/140 (72%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381 || || || || || | || ||||| || ||||| || |||||||| |||||||| | Sbjct 431 CCRGCRAAGATRAGACGYTGCTGGTCAGGRGGAATACCCTCCTTGTCCTGAATCTTGCTC 372 Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 |||||| ||||||||||||| || || || | ||||| || || || || | Sbjct 371 TTGACGTTGTCGATGGTGTCTGAGCTCTCCACCTCTAGTGTGATAGTCTTKCCGGTSARW 312 Query 68442 GTCTTGACGAATATCTGCAT 68461 |||||||| || || ||||| Sbjct 311 GTCTTGACRAARATYTGCAT 292 >seq927 Length=85386 Score = 159 bits (176), Expect = 6e-34 Identities = 304/444 (68%), Gaps = 18/444 (4%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || ||||||||||||| |||||| | Sbjct 52261 CATGACACCAGCCTTCTGGTAGTCACCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGC 52202 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 | ||| ||| |||||||||||| |||||||| ||| | | ||| || || Sbjct 52201 CAAGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCC 52142 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | ||||||||| |||||||| ||||||| || |||||| | | ||| Sbjct 52141 GAGGGCCACCAGCAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGCGTT 52082 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||||| || || |||||| | ||||| | ||| |||| ||| | |||| | Sbjct 52081 CATGCCAAGCAGGCCGCAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATTCCGACAG- 52023 Query 10175 TTCCTCGACGATGCT---CTTTACCAC------GTCAAGGGACAGCTTGTTCTCGAGCTT 10225 ||||||| ||| | || ||||| ||| ||| | | | |||| | | Sbjct 52022 --CCTCGACAATGATATCCTCAACCACCTTGGGGTC--GGGGC-GGTGGTTC---ATGTG 51971 Query 10226 CGAATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTT 10285 || |||| || |||| | |||||| ||||| || ||| ||| |||||||| Sbjct 51970 GGAGAACAGCAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTT 51911 Query 10286 GGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGA 10345 ||| ||| ||||| ||||| || || || || ||||||||| |||| | ||| || Sbjct 51910 GGAGAAAGTGAGACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGA 51851 Query 10346 CCCGGAGAACAGAAGACCCTCCAC 10369 |||||||| | | ||||||||| Sbjct 51850 GCCGGAGAAGAAGATACCCTCCAC 51827 Score = 86.0 bits (94), Expect = 1e-11 Identities = 120/167 (72%), Gaps = 6/167 (4%) Strand=Plus/Minus Query 10623 AGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAG 10682 |||||||| | || || || ||| | | || |||||| |||||| ||| || |||| Sbjct 51514 AGGTTCTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGAGACGAAG 51455 Query 10683 TGGCGCTCATCATCGTTCA---GTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGG 10739 | |||||||| ||||||| | || | ||||||| | ||||| | || | | Sbjct 51454 TAACGCTCATCGTCGTTCAAGCGGTTGT---GCCAGTCGTGAAGATCCTTGGAAAGATCG 51398 Query 10740 ACCTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 | |||||| |||||||||||| || |||||||||||||||| || Sbjct 51397 ATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTG 51351 >seq1023 Length=175318 Score = 138 bits (152), Expect = 2e-27 Identities = 140/180 (78%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| |||||||| || Sbjct 138127 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 138068 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | |||||||| || |||||||| |||||||| || ||||| | ||||||| ||| Sbjct 138067 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 138008 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || ||||| |||||||||||||| Sbjct 138007 ATGGTGTC-GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 137949 >seq189 Length=53202 Score = 132 bits (146), Expect = 9e-26 Identities = 151/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||| || || |||||||| || ||||||||||| || || Sbjct 52979 CCGCCACGGAGRCGRAGGACCARRTGKAGAGTGGACTCYTTCTGGATGTTATAGTCRGAC 52920 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| ||||| || || | | || ||||| || ||| Sbjct 52919 AGKGTRCGACCGTCCTCSAGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCMGGGGGA 52860 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 ||||| |||||||| || ||||||| ||| || |||||||| || ||| || || || Sbjct 52859 ATGCCCTCCTTGTCCTGGATCTTTGACTTSACRTTGTCGATGGTATC-GCTGGACTCAAC 52801 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGA 68439 || | ||||||||| || || |||| Sbjct 52800 CTCAAGGGTGATGGTCTTGCCAGTGA 52775 Score = 105 bits (116), Expect = 1e-17 Identities = 113/149 (76%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 || || || | |||||| ||||| || || | | || ||||| || |||||||| ||| Sbjct 53196 CCGTCCTCCAGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCC 53137 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGT 68422 ||||| || ||||||| ||| || |||||||| || ||| || || || || | ||| Sbjct 53136 TTGTCCTGGATCTTTGACTTSACRTTGTCGATGGTATC-GCTRGACTCAACCTCAAGGGT 53078 Query 68423 GATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 ||||| ||||| || ||||||||||||| Sbjct 53077 RATGGTCTTTCCGGTCAGGGTCTTGACGA 53049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921608944312960