Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq927 149 6e-31
seq1023 102 8e-17
>seq927
Length=85386
Score = 149 bits (164), Expect = 6e-31
Identities = 302/446 (68%), Gaps = 23/446 (5%)
Strand=Plus/Plus
Query 52402 TGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTT 52461
|||| ||||||||| || ||||| | || || |||||| || ||| ||||||| |
Sbjct 51810 TGGTTGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCCGGCTCATTCGCCTCCATCTTCT 51869
Query 52462 ACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCG 52521
| || | | ||| ||||||| || || || ||| |||||||||||| || || |
Sbjct 51870 GGCTGAAGAAGCGTGGCCTAATGCCTGGTCTCACTTTCTCCAACGAGTTGATCTCCCGTG 51929
Query 52522 ACGAAGGACTGCACACGGACTTTGCGTGCCT------CTACTACAAGACGCGCGTGACCG 52575
| || || || ||||| |||||||| || || || | ||| || | | |||
Sbjct 51930 ATGAGGGTCTCCACACTGACTTTGCTTGTCTGCTGTTCTCCCACATGAACCACCGCCCCG 51989
Query 52576 AA---AAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAA 52632
| || ||| | ||| | || ||| ||||| || | |||||
Sbjct 51990 ACCCCAAGGTGGTTGAGGATATCAT--------TGTC----GAGGCTGTCGGAATCGAGC 52037
Query 52633 AGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGT 52692
||||||| | || | ||| || || || ||||| ||||||||||| || ||||
Sbjct 52038 AGGAGTTCCTCACTGACGCTCTTCCCTGCGGCCTGCTTGGCATGAACGCCAAGCTGATGT 52097
Query 52693 GCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTAC 52751
|||||||||| ||||| || || || || ||| ||||| ||| |||| | | ||||||
Sbjct 52098 GCGAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTC-GGCAACAAGAAGTAC 52156
Query 52752 TTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAAC 52811
| ||||||| ||| || || || || ||| | ||| || | | ||||||||||||
Sbjct 52157 TACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCTTGGCCGGCAAGACCAAC 52216
Query 52812 TTTTTCGAGAAGCGAGTCGGCGAGTA 52837
|| ||||| ||||| ||||| || ||
Sbjct 52217 TTCTTCGAAAAGCGTGTCGGTGACTA 52242
>seq1023
Length=175318
Score = 102 bits (112), Expect = 8e-17
Identities = 135/184 (73%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||||||| || || |||||||| || || |||| |||
Sbjct 138129 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 138070
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542
| |||||||||||||| || || || || || ||||| || | || || || | |||
Sbjct 138069 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 138011
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | ||||||| ||||||| || |||| || | || ||||| ||||| || || ||
Sbjct 138010 -TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 137952
Query 138603 AAAA 138606
|||
Sbjct 137951 GAAA 137948
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496255154568960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |