Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq721 212 8e-50 seq927 120 4e-22 seq45 104 3e-17 >seq721 Length=8534 Score = 212 bits (234), Expect = 8e-50 Identities = 707/1079 (66%), Gaps = 27/1079 (3%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||| | ||||| ||||| |||||||||||| |||| ||||| || | Sbjct 6229 TAGATGTTCGAGGTGTAAGGCTCGAAGCACTCATTGAAGCCCAGAATTTGACTGGTACTG 6170 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || || |||||||| || | | || |||||||||| ||| | | ||| || Sbjct 6169 GCAGTAGGCATGGGGGCAACCAACAGACTGTTGCGGACACCAGTCTCGGCAATCTTGGCC 6110 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTT-GTCTCCCCCTCCCACATATCAAACTGGAG 116081 || |||| | ||||||| || || | | | | |||||||| || |||| || Sbjct 6109 TTCAGGGAGGCCCAGTCCCAGA-GATCGGTAGGGGTGCGGTCCCACATGTCGTACTGCAG 6051 Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC-GCCA 116140 ||| || || || | || || || | |||||||| || ||| | | || | || Sbjct 6050 GATGCCCTGCGAGACGGGAGAGCCAGGGTAAGTCTCATAGGGACCC--AGCTTCTTGGCA 5993 Query 116141 AT-TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-T 116198 || |||| | || | ||| |||| || || ||||| || || | || | | Sbjct 5992 ATCTCGGCGGAAGCAGTCAAGGCACCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGT 5933 Query 116199 TGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAA-ATAAATACATCCGCGAGAC 116257 || || ||||||| || || |||| ||||| || | | || |||| || |||| Sbjct 5932 TGTCT-GGCCTCGGGAGAGTCGAACGGCAGACG-CAGAGCCAGGAAAGCATCAGCAAGAC 5875 Query 116258 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---A 116314 | | ||||||||| | || ||||| || | | || ||| || ||| | Sbjct 5874 CGTTGACACCGAGAGCGATGGGGCGGTGACGGAAGTTGCTCTTCTTCGC---CTCAGGAA 5818 Query 116315 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 116374 |||| || | || |||| || | | | || ||||| | || ||||| || | Sbjct 5817 CGGGGTAGTAGTTGATATCAATGATCTTGTTCAGATTGTGCACGAGAACCTGGACGACCT 5758 Query 116375 CATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA---TTGACATACTTAGGAAGGG 116431 | || ||||| || ||||| | || || || | || | |||||| | || |||| Sbjct 5757 CGTGGAGCTTGCCGAAATCATA-CT-CGCCTCGCG-CAGAGTCGACATAGGTGGGGAGGG 5701 Query 116432 CGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 116491 ||| || ||||| || || |||| |||||| | ||||||| ||||| || | Sbjct 5700 CGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACTGTACTCGATAATCTCAG 5641 Query 116492 TACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACG 116551 | |||| || || || ||| || |||| |||||| || || ||| |||| || | Sbjct 5640 TGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAG 5581 Query 116552 CATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 116611 |||||||||||||||| | || | || ||||| || |||| || |||||| || | || Sbjct 5580 CATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCGTACC 5521 Query 116612 ATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAG 116670 | | | || | | || | | || | | | || ||||||| ||||||||| | |||| Sbjct 5520 AGAGCTTCTGAGCCTTG-ATGGTCTTGCGGCCACGGCCCTCCTGCTCGTACTTGGCGTAG 5462 Query 116671 AGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAG 116730 || ||||| ||||| ||||| | || | || || || |||| || || |||||| Sbjct 5461 AGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGGGGCAGAAG 5402 Query 116731 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 116790 || | ||| | ||| |||| || |||||||||||||| || ||| |||| || || Sbjct 5401 AGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCCACAGAGCG 5342 Query 116791 GAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 116850 |||| || || ||| |||| | || || | || ||||| |||| || | || Sbjct 5341 TAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGATCGAGGAAC 5282 Query 116851 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGA 116907 || | || ||| ||||||||||| |||||||| | || | | || ||| | Sbjct 5281 TCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTA 5222 Query 116908 CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACC 116966 ||| |||||| ||||| | || || |||||| || || ||||| |||| ||||| Sbjct 5221 CCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACC 5163 >seq927 Length=85386 Score = 120 bits (132), Expect = 4e-22 Identities = 117/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || |||||||||||| ||||||||||| | || || ||||| ||||| Sbjct 51955 AGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACC 51896 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||| || || |||||||||| |||||| || | |||||||| ||||||||||| Sbjct 51895 AGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGAT 51836 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGC 127669 ||||||||| ||||| |||| |||||| Sbjct 51835 ACCCTCCACAGCGGCGAAGGCAACCAGACGC 51805 >seq45 Length=26065 Score = 104 bits (114), Expect = 3e-17 Identities = 330/504 (65%), Gaps = 27/504 (5%) Strand=Plus/Plus Query 12702 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 12761 || ||||| || || || || | ||| || | |||||| | ||| || || || | Sbjct 20336 CGGTCAAATCGTCCGGGACGCATGAGTGCCTTGTCAAGAACATCCGGTCGATTGGTACCA 20395 Query 12762 GCGATGACAACGA--TGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAGTTGAT 12819 || | |||||| | ||| | | ||| ||| |||||||||||||| | | || | Sbjct 20396 GCCAAGACAACCACTTGCTCAGA--GGTATTGAAACCATCCATCTCAGTGAGAATCTGGT 20453 Query 12820 TGATGGTTTGTTCACGTTCATCATTCGCGGGCATACCACC--CGCACTGCGTTGCT---- 12873 ||| || |||||||||||| || | |||||| || | | ||||| Sbjct 20454 TGAGAGTGCTTTCACGTTCATCGTTTCC------ACCACCAACGTTCGACTTTGCTCGAG 20507 Query 12874 ---TACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAA 12930 | || | || |||||||| |||||||| | ||| || || ||| | ||||| Sbjct 20508 ACTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCGG 20567 Query 12931 CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG 12990 | | |||| ||| || || | || |||||||| |||||||| || ||||| | || Sbjct 20568 TTGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCGG 20627 Query 12991 --CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAG 13048 | | || || || | ||| || ||| ||||||||| || |||| || || | Sbjct 20628 AACCACTGA-CACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCAA 20685 Query 13049 GGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC--A 13106 ||||| || || || || || | ||||| ||||||||| || ||| | ||||| | Sbjct 20686 TGTCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCAA 20745 Query 13107 CTTCCAAAGTAGCGCTCGGGTTGTTTAAGAAAGTCCACGATTTCTTCCAATTCATCCTTC 13166 |||| | | ||||||||||| | || ||| |||| ||| | ||| |||| Sbjct 20746 CTTCTCGA--ACCGCTCGGGTTGCTGGAGGAAGCTAACGAATTCCATGATCTCAACCTTG 20803 Query 13167 GCGGCGTCGATGCCTTCAACGTCA 13190 || |||| || || |||||||| Sbjct 20804 GCTTCGTCCATACCAGCAACGTCA 20827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613498242794880