Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq721 212 8e-50
seq927 120 4e-22
seq45 104 3e-17
>seq721
Length=8534
Score = 212 bits (234), Expect = 8e-50
Identities = 707/1079 (66%), Gaps = 27/1079 (3%)
Strand=Plus/Minus
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|||||||| | ||||| ||||| |||||||||||| |||| ||||| || |
Sbjct 6229 TAGATGTTCGAGGTGTAAGGCTCGAAGCACTCATTGAAGCCCAGAATTTGACTGGTACTG 6170
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
|| || |||||||| || | | || |||||||||| ||| | | ||| ||
Sbjct 6169 GCAGTAGGCATGGGGGCAACCAACAGACTGTTGCGGACACCAGTCTCGGCAATCTTGGCC 6110
Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTT-GTCTCCCCCTCCCACATATCAAACTGGAG 116081
|| |||| | ||||||| || || | | | | |||||||| || |||| ||
Sbjct 6109 TTCAGGGAGGCCCAGTCCCAGA-GATCGGTAGGGGTGCGGTCCCACATGTCGTACTGCAG 6051
Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC-GCCA 116140
||| || || || | || || || | |||||||| || ||| | | || | ||
Sbjct 6050 GATGCCCTGCGAGACGGGAGAGCCAGGGTAAGTCTCATAGGGACCC--AGCTTCTTGGCA 5993
Query 116141 AT-TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCA-T 116198
|| |||| | || | ||| |||| || || ||||| || || | || | |
Sbjct 5992 ATCTCGGCGGAAGCAGTCAAGGCACCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGT 5933
Query 116199 TGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAA-ATAAATACATCCGCGAGAC 116257
|| || ||||||| || || |||| ||||| || | | || |||| || ||||
Sbjct 5932 TGTCT-GGCCTCGGGAGAGTCGAACGGCAGACG-CAGAGCCAGGAAAGCATCAGCAAGAC 5875
Query 116258 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---A 116314
| | ||||||||| | || ||||| || | | || ||| || ||| |
Sbjct 5874 CGTTGACACCGAGAGCGATGGGGCGGTGACGGAAGTTGCTCTTCTTCGC---CTCAGGAA 5818
Query 116315 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 116374
|||| || | || |||| || | | | || ||||| | || ||||| || |
Sbjct 5817 CGGGGTAGTAGTTGATATCAATGATCTTGTTCAGATTGTGCACGAGAACCTGGACGACCT 5758
Query 116375 CATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA---TTGACATACTTAGGAAGGG 116431
| || ||||| || ||||| | || || || | || | |||||| | || ||||
Sbjct 5757 CGTGGAGCTTGCCGAAATCATA-CT-CGCCTCGCG-CAGAGTCGACATAGGTGGGGAGGG 5701
Query 116432 CGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 116491
||| || ||||| || || |||| |||||| | ||||||| ||||| || |
Sbjct 5700 CGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACTGTACTCGATAATCTCAG 5641
Query 116492 TACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACG 116551
| |||| || || || ||| || |||| |||||| || || ||| |||| || |
Sbjct 5640 TGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAG 5581
Query 116552 CATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 116611
|||||||||||||||| | || | || ||||| || |||| || |||||| || | ||
Sbjct 5580 CATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCGTACC 5521
Query 116612 ATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAG 116670
| | | || | | || | | || | | | || ||||||| ||||||||| | ||||
Sbjct 5520 AGAGCTTCTGAGCCTTG-ATGGTCTTGCGGCCACGGCCCTCCTGCTCGTACTTGGCGTAG 5462
Query 116671 AGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAG 116730
|| ||||| ||||| ||||| | || | || || || |||| || || ||||||
Sbjct 5461 AGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGGGGCAGAAG 5402
Query 116731 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 116790
|| | ||| | ||| |||| || |||||||||||||| || ||| |||| || ||
Sbjct 5401 AGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCCACAGAGCG 5342
Query 116791 GAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 116850
|||| || || ||| |||| | || || | || ||||| |||| || | ||
Sbjct 5341 TAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGATCGAGGAAC 5282
Query 116851 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGA 116907
|| | || ||| ||||||||||| |||||||| | || | | || ||| |
Sbjct 5281 TCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTA 5222
Query 116908 CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACC 116966
||| |||||| ||||| | || || |||||| || || ||||| |||| |||||
Sbjct 5221 CCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACC 5163
>seq927
Length=85386
Score = 120 bits (132), Expect = 4e-22
Identities = 117/151 (77%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578
|||||| || |||||||||||| ||||||||||| | || || ||||| |||||
Sbjct 51955 AGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACC 51896
Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638
||||| || || |||||||||| |||||| || | |||||||| |||||||||||
Sbjct 51895 AGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGAT 51836
Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGC 127669
||||||||| ||||| |||| ||||||
Sbjct 51835 ACCCTCCACAGCGGCGAAGGCAACCAGACGC 51805
>seq45
Length=26065
Score = 104 bits (114), Expect = 3e-17
Identities = 330/504 (65%), Gaps = 27/504 (5%)
Strand=Plus/Plus
Query 12702 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 12761
|| ||||| || || || || | ||| || | |||||| | ||| || || || |
Sbjct 20336 CGGTCAAATCGTCCGGGACGCATGAGTGCCTTGTCAAGAACATCCGGTCGATTGGTACCA 20395
Query 12762 GCGATGACAACGA--TGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAGTTGAT 12819
|| | |||||| | ||| | | ||| ||| |||||||||||||| | | || |
Sbjct 20396 GCCAAGACAACCACTTGCTCAGA--GGTATTGAAACCATCCATCTCAGTGAGAATCTGGT 20453
Query 12820 TGATGGTTTGTTCACGTTCATCATTCGCGGGCATACCACC--CGCACTGCGTTGCT---- 12873
||| || |||||||||||| || | |||||| || | | |||||
Sbjct 20454 TGAGAGTGCTTTCACGTTCATCGTTTCC------ACCACCAACGTTCGACTTTGCTCGAG 20507
Query 12874 ---TACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAA 12930
| || | || |||||||| |||||||| | ||| || || ||| | |||||
Sbjct 20508 ACTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCGG 20567
Query 12931 CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG 12990
| | |||| ||| || || | || |||||||| |||||||| || ||||| | ||
Sbjct 20568 TTGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCGG 20627
Query 12991 --CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAG 13048
| | || || || | ||| || ||| ||||||||| || |||| || || |
Sbjct 20628 AACCACTGA-CACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCAA 20685
Query 13049 GGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC--A 13106
||||| || || || || || | ||||| ||||||||| || ||| | ||||| |
Sbjct 20686 TGTCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCAA 20745
Query 13107 CTTCCAAAGTAGCGCTCGGGTTGTTTAAGAAAGTCCACGATTTCTTCCAATTCATCCTTC 13166
|||| | | ||||||||||| | || ||| |||| ||| | ||| ||||
Sbjct 20746 CTTCTCGA--ACCGCTCGGGTTGCTGGAGGAAGCTAACGAATTCCATGATCTCAACCTTG 20803
Query 13167 GCGGCGTCGATGCCTTCAACGTCA 13190
|| |||| || || ||||||||
Sbjct 20804 GCTTCGTCCATACCAGCAACGTCA 20827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613498242794880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |