Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1023 132 5e-26 seq189 107 2e-18 seq923 84.2 2e-11 >seq1023 Length=175318 Score = 132 bits (146), Expect = 5e-26 Identities = 140/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || ||||| | || |||||||||||||||||||| | Sbjct 138129 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 138070 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| ||||| ||||| | || | || |||||||||| |||||| |||||| ||| | Sbjct 138069 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 138011 Query 46524 CC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || ||||| | || ||||| || |||||||| || || || Sbjct 138010 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 137951 Query 46583 AA 46584 || Sbjct 137950 AA 137949 >seq189 Length=53202 Score = 107 bits (118), Expect = 2e-18 Identities = 124/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| || ||||| || || || || |||| || |||||||| ||||| || Sbjct 52944 CTCYTTCTGGATGTTATAGTCRGACAGKGTRCGACCGTCCTCSAGCTGCTTKCCGGCAAA 52885 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||||||||| | || | || |||||||||| |||||| ||| | | | Sbjct 52884 GATCAAACGCTGCTGGTCMGGGGGAATGCCCTCCTTGTCCTGGATCTTTGACTTSA-CRT 52826 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | || ||||| || || || || | |||||||| ||||| || Sbjct 52825 TGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 52777 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 46437 CGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCT 46496 |||| || |||||||| ||||| || ||||| ||||||||||| | || | || ||||| Sbjct 53195 CGTCCTCCAGCTGCTTKCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCT 53136 Query 46497 TGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTG 46555 ||||| |||||| ||| | | | | | | || ||||| || || || || | || Sbjct 53135 TGTCCTGGATCTTTGACTTSA-CRTTGTCGATGGTATCGCTRGACTCAACCTCAAGGGTR 53077 Query 46556 ATGGTTTTGCCCGTCAGCGTTTTAAC 46581 ||||| || || ||||| || || || Sbjct 53076 ATGGTCTTTCCGGTCAGGGTCTTGAC 53051 >seq923 Length=14999 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || |||||||| |||| ||||||||||| || ||||| Sbjct 11525 CTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAA 11466 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 ||||| || || ||||| | || | | ||||||||| Sbjct 11465 GATCAAACGTTGTTGGTCAGGGGGAATACCCTCCTTGTC 11427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565230147519360