Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq927 181 1e-40 seq1023 127 2e-24 seq190 84.2 2e-11 >seq927 Length=85386 Score = 181 bits (200), Expect = 1e-40 Identities = 206/276 (75%), Gaps = 3/276 (1%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||| |||||||| || || |||| ||||| | ||||||||| ||| || || Sbjct 51629 GTAGGTATCGATGAGCAGAGAGTAGGTTTCAGAGTGGATGTTCTCCATCATGATCTGGAA 51570 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 |||||| ||||| || |||||| | ||| || ||| | ||| ||||| || || || Sbjct 51569 GCCGTAGAAGCAACGGGCCTCGGGGATCTGAACCTCTCCACTGAAGCGCTCAACAAGGTT 51510 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 |||||||| || |||||| ||||||||| ||||| || ||||| || ||| | || Sbjct 51509 CTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGAGACGAAGTAACG 51450 Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 ||| | |||||||||||| | ||||||| | |||||||| || || | |||||| Sbjct 51449 CTCATCGTCGTTCAAGCGGTTGTGCCAGTCGTGAAGATCCTTGGAAAGATCGATCTCCTC 51390 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | ||||||| || || |||||||| || |||||||| Sbjct 51389 GGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACAT 51354 Score = 145 bits (160), Expect = 8e-30 Identities = 327/482 (68%), Gaps = 12/482 (2%) Strand=Plus/Minus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 || || || || || || || || ||||||| ||| | ||| || || ||||||||| Sbjct 52227 TTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGGACTCCATGAAGTCGAAGGGGTTG 52168 Query 132685 GCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | |||||||| ||| | |||||| || | || ||||| | ||| || |||||| Sbjct 52167 GTAGCGTTGTAGTACTTCTTGTTGCCGA---GGGCCACCAGCAGGCGGTCAGCGACGAAC 52111 Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGAC-GCACCGGCAGCGCTT 132799 || ||||| | |||| | || || | | | || ||||| | ||| || || || | Sbjct 52110 TCAATGTACTCGCACATCAGCTTGGCGTTCATG-CCAAGCAGGCCGCAG-GGAAGAGCGT 52053 Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859 | ||||| || |||||||| |||| || ||| | ||| ||| ||| | | | Sbjct 52052 CAGTGAGGAACTCCTGCTCGATTCCGACAGCCTCGACAATGATATCCTCAAC-CACCTTG 51994 Query 132860 CGCTCGGC-CGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCC 132918 | |||| || || || || ||||| || ||||||||||| || | ||| Sbjct 51993 GGGTCGGGGCGGTGGTTCATGTGGGAGAACAGCAGACAAGCAAAGTCAGTGTGGAGACCC 51934 Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978 || || | ||| || | |||||| |||||| | || ||||| ||||| || || || Sbjct 51933 TCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACCAGGCATTAGGCCACGCTTCTTC 51874 Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038 ||||| || |||| |||||| ||| || ||||||| ||||| || || ||||| || Sbjct 51873 AGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATACCCTCCACAGCGGCGAAGGCA 51814 Query 133039 ACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098 ||||| ||| |||| || | || | | ||||||||| || ||||| | |||| Sbjct 51813 ACCAGACGCGAAGCGAAGGTTGACTCACGGTCGTTGATCCAGCGGAGGGCCCAGTTGGCC 51754 Query 133099 TT 133100 || Sbjct 51753 TT 51752 >seq1023 Length=175318 Score = 127 bits (140), Expect = 2e-24 Identities = 142/186 (76%), Gaps = 4/186 (2%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || ||||| || ||||| ||| |||| |||||| | | ||||| | | Sbjct 137949 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 138008 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | |||| | |||| || |||| ||||| ||||| |||||| | ||||||||||| | Sbjct 138009 GACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTC 138066 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| ||||| ||||| || || | |||||||| | ||||||||||||||| | Sbjct 138067 TGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGA 138126 Query 38431 AGGAAG 38436 ||| || Sbjct 138127 AGGTAG 138132 >seq190 Length=431 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| || ||||| | || |||||| | || Sbjct 64 ATGCAGATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTCGAGTCATCC 123 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | || || || | || || ||||| |||||| | ||||| Sbjct 124 GATACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 183 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||| | || || || ||||| || || | ||||| || ||| |||||| Sbjct 184 CAACGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGCACACTTTCCGATTACAAC 243 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| |||||| | || || || | || || ||| Sbjct 244 ATCCAGAAGGAATCCACACTCCACCTTGTCCTCCGT 279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500165497477120