Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq927 181 1e-40
seq1023 127 2e-24
seq190 84.2 2e-11
>seq927
Length=85386
Score = 181 bits (200), Expect = 1e-40
Identities = 206/276 (75%), Gaps = 3/276 (1%)
Strand=Plus/Minus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
|||||| |||||||| || || |||| ||||| | ||||||||| ||| || ||
Sbjct 51629 GTAGGTATCGATGAGCAGAGAGTAGGTTTCAGAGTGGATGTTCTCCATCATGATCTGGAA 51570
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286
|||||| ||||| || |||||| | ||| || ||| | ||| ||||| || || ||
Sbjct 51569 GCCGTAGAAGCAACGGGCCTCGGGGATCTGAACCTCTCCACTGAAGCGCTCAACAAGGTT 51510
Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346
|||||||| || |||||| ||||||||| ||||| || ||||| || ||| | ||
Sbjct 51509 CTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGAGACGAAGTAACG 51450
Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403
||| | |||||||||||| | ||||||| | |||||||| || || | ||||||
Sbjct 51449 CTCATCGTCGTTCAAGCGGTTGTGCCAGTCGTGAAGATCCTTGGAAAGATCGATCTCCTC 51390
Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| ||||||| || || |||||||| || ||||||||
Sbjct 51389 GGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACAT 51354
Score = 145 bits (160), Expect = 8e-30
Identities = 327/482 (68%), Gaps = 12/482 (2%)
Strand=Plus/Minus
Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684
|| || || || || || || || ||||||| ||| | ||| || || |||||||||
Sbjct 52227 TTTTCGAAGAAGTTGGTCTTGCCGGCCAAGGAGATGGACTCCATGAAGTCGAAGGGGTTG 52168
Query 132685 GCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741
| | |||||||| ||| | |||||| || | || ||||| | ||| || ||||||
Sbjct 52167 GTAGCGTTGTAGTACTTCTTGTTGCCGA---GGGCCACCAGCAGGCGGTCAGCGACGAAC 52111
Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGAC-GCACCGGCAGCGCTT 132799
|| ||||| | |||| | || || | | | || ||||| | ||| || || || |
Sbjct 52110 TCAATGTACTCGCACATCAGCTTGGCGTTCATG-CCAAGCAGGCCGCAG-GGAAGAGCGT 52053
Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859
| ||||| || |||||||| |||| || ||| | ||| ||| ||| | | |
Sbjct 52052 CAGTGAGGAACTCCTGCTCGATTCCGACAGCCTCGACAATGATATCCTCAAC-CACCTTG 51994
Query 132860 CGCTCGGC-CGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCC 132918
| |||| || || || || ||||| || ||||||||||| || | |||
Sbjct 51993 GGGTCGGGGCGGTGGTTCATGTGGGAGAACAGCAGACAAGCAAAGTCAGTGTGGAGACCC 51934
Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978
|| || | ||| || | |||||| |||||| | || ||||| ||||| || || ||
Sbjct 51933 TCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACCAGGCATTAGGCCACGCTTCTTC 51874
Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038
||||| || |||| |||||| ||| || ||||||| ||||| || || ||||| ||
Sbjct 51873 AGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATACCCTCCACAGCGGCGAAGGCA 51814
Query 133039 ACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098
||||| ||| |||| || | || | | ||||||||| || ||||| | ||||
Sbjct 51813 ACCAGACGCGAAGCGAAGGTTGACTCACGGTCGTTGATCCAGCGGAGGGCCCAGTTGGCC 51754
Query 133099 TT 133100
||
Sbjct 51753 TT 51752
>seq1023
Length=175318
Score = 127 bits (140), Expect = 2e-24
Identities = 142/186 (76%), Gaps = 4/186 (2%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || ||||| || ||||| ||| |||| |||||| | | ||||| | |
Sbjct 137949 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 138008
Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370
| |||| | |||| || |||| ||||| ||||| |||||| | ||||||||||| |
Sbjct 138009 GACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTC 138066
Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430
| || | ||| ||||| ||||| || || | |||||||| | ||||||||||||||| |
Sbjct 138067 TGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGA 138126
Query 38431 AGGAAG 38436
||| ||
Sbjct 138127 AGGTAG 138132
>seq190
Length=431
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| || ||||| | || |||||| | ||
Sbjct 64 ATGCAGATTTTCGTCAAGACACTCACCGGCAAGACTATCACACTTGAAGTCGAGTCATCC 123
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | || || || | || || ||||| |||||| | |||||
Sbjct 124 GATACTATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCTGACCAG 183
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || ||||| | || || || ||||| || || | ||||| || ||| ||||||
Sbjct 184 CAACGTCTCATCTTTGCCGGAAAGCAGCTTGAGGATGGTCGCACACTTTCCGATTACAAC 243
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||| |||||| | || || || | || || |||
Sbjct 244 ATCCAGAAGGAATCCACACTCCACCTTGTCCTCCGT 279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500165497477120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |