Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq721 239 5e-58
seq45 118 1e-21
seq927 109 6e-19
>seq721
Length=8534
Score = 239 bits (264), Expect = 5e-58
Identities = 578/868 (67%), Gaps = 19/868 (2%)
Strand=Plus/Minus
Query 106447 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 106506
|||||| | || ||||||| || |||| |||||||||||| |||||| |
Sbjct 5717 GACATAGGTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACT 5658
Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566
|||||| | ||| || || |||| ||| || || ||| || |||| ||||| |||||
Sbjct 5657 GTACTCGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTT 5598
Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626
|||||| |||||||| |||||||||||||||||| |||| | || ||||| ||||| |
Sbjct 5597 ACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGC 5538
Query 106627 CTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCT 106682
|| |||||| || | ||| | | || | | || | |||| || |||| || ||||
Sbjct 5537 CTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG----ATGGTCTTGCGGCCACGGCCCT 5482
Query 106683 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 106742
|| ||||||||| | |||||| || || ||||| ||||| | || | || || |
Sbjct 5481 CCTGCTCGTACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAG 5422
Query 106743 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAA 106802
| |||| | || ||||| || | ||| | ||| |||| || ||||||||||| |
Sbjct 5421 GGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGA 5362
Query 106803 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGT 106862
| || || ||||||| | | || || || | | ||| |||| || | ||| || |
Sbjct 5361 GATCGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACCGTGAT 5302
Query 106863 TGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 106922
| || | || |||||||| | || ||| |||||||| ||||| || |||| || |
Sbjct 5301 TCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAA 5242
Query 106923 TAGATCC------CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATA 106976
| || ||| | ||| | || | ||||| || || ||| |||||| |
Sbjct 5241 AGGCACCGGGGCGCTTGTTA---CCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACA 5185
Query 106977 CGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTAT 107036
| || ||||| |||| |||||| | || || || || || ||| |||
Sbjct 5184 CACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGG 5125
Query 107037 TGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCAC 107096
| || | | |||| | | || ||||| ||||| ||| ||||| ||||
Sbjct 5124 TAGCGCGAATGCGGTGGACATTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCAC 5065
Query 107097 ACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGC 107156
| | | ||||| |||| ||||| | || ||| | | | | | |||||||
Sbjct 5064 AGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGC 5005
Query 107157 AACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGA 107216
|| | | ||| ||| || ||| | |||||||| || || || | |||||| |||
Sbjct 5004 AAGATGCGAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGA 4945
Query 107217 ACATAC-CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGG 107275
| ||| |||||||||| || ||||||||| | | | |||||||| || |||||
Sbjct 4944 A-GTACTTTTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGA 4886
Query 107276 ATGCCGATGGCCACACGCATAAACATGT 107303
|| |||| || |||||||| | || ||
Sbjct 4885 ATTCCGACAGCAACACGCATCAGCAAGT 4858
>seq45
Length=26065
Score = 118 bits (130), Expect = 1e-21
Identities = 302/453 (67%), Gaps = 29/453 (6%)
Strand=Plus/Plus
Query 9192 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9251
|| ||||| || || ||||| | ||| || | ||||| | ||| ||||| || |
Sbjct 20336 CGGTCAAATCGTCCGGGACGCATGAGTGCCTTGTCAAGAACATCCGGTCGATTGGTACCA 20395
Query 9252 GCGATGACAACAATACCTGTTTCAT---TATCAAAACCATCCATCTCTGTCAAAAGTTGG 9308
|| | |||||| | || ||| ||| |||||||||||||| || | || |||
Sbjct 20396 GCCAAGACAACCA---CTTGCTCAGAGGTATTGAAACCATCCATCTCAGTGAGAATCTGG 20452
Query 9309 TTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTG--CGTTGCT--- 9363
|| | ||| ||| |||||||| || | ||||||| | | | |||||
Sbjct 20453 TTGAGAGTGCTTTCACGTTCATCGTTTCC------ACCACCAACGTTCGACTTTGCTCGA 20506
Query 9364 ----TTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCG 9419
|||| | |||||||| ||||||||||||| || || || ||| | ||||||
Sbjct 20507 GACTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCG 20566
Query 9420 ATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTT 9479
|| | ||||||||||| || | || || ||||| |||||||| || ||||| |
Sbjct 20567 GTTGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCG 20626
Query 9480 G--CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 9537
| | | | ||| || | ||| || || |||||||| ||| |||| || || |
Sbjct 20627 GAACCACTG-ACACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCA 20684
Query 9538 GAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC-- 9595
|||||||| ||||| || ||| | ||| | |||||| || |||||||| || ||
Sbjct 20685 ATGTCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCA 20744
Query 9596 ACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAA 9628
||||| | | | ||| ||||||| ||| ||
Sbjct 20745 ACTTC--TCGAACCGCTCGGGTTGCTGGAGGAA 20775
>seq927
Length=85386
Score = 109 bits (120), Expect = 6e-19
Identities = 120/160 (75%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333
||||| || ||||||||||||||| ||||| || | || || ||||| || ||
Sbjct 51954 GCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACCA 51895
Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393
||||| || || |||||||||| ||| | || | | |||||| |||||||||||||||
Sbjct 51894 GGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATA 51835
Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433
||||||||| || || |||| || ||| |||||||
Sbjct 51834 CCCTCCACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGG 51795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589972186280320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |