Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01- 09] 1,168 sequences; 26,071,999 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq721 239 5e-58 seq45 118 1e-21 seq927 109 6e-19 >seq721 Length=8534 Score = 239 bits (264), Expect = 5e-58 Identities = 578/868 (67%), Gaps = 19/868 (2%) Strand=Plus/Minus Query 106447 GACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGT 106506 |||||| | || ||||||| || |||| |||||||||||| |||||| | Sbjct 5717 GACATAGGTGGGGAGGGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGTACT 5658 Query 106507 GTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTT 106566 |||||| | ||| || || |||| ||| || || ||| || |||| ||||| ||||| Sbjct 5657 GTACTCGATAATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTT 5598 Query 106567 ACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGA 106626 |||||| |||||||| |||||||||||||||||| |||| | || ||||| ||||| | Sbjct 5597 ACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGC 5538 Query 106627 CTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCT 106682 || |||||| || | ||| | | || | | || | |||| || |||| || |||| Sbjct 5537 CTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTG----ATGGTCTTGCGGCCACGGCCCT 5482 Query 106683 CCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTG 106742 || ||||||||| | |||||| || || ||||| ||||| | || | || || | Sbjct 5481 CCTGCTCGTACTTGGCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCTAGGCCAG 5422 Query 106743 GTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAA 106802 | |||| | || ||||| || | ||| | ||| |||| || ||||||||||| | Sbjct 5421 GGGCCTCATTGGGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGA 5362 Query 106803 GGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGT 106862 | || || ||||||| | | || || || | | ||| |||| || | ||| || | Sbjct 5361 GATCGGGGGTCCACAGAGCGTAGAAAAGGTCACGAGCGCGAACCTCCTCCTTACCGTGAT 5302 Query 106863 TGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA 106922 | || | || |||||||| | || ||| |||||||| ||||| || |||| || | Sbjct 5301 TCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAA 5242 Query 106923 TAGATCC------CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATA 106976 | || ||| | ||| | || | ||||| || || ||| |||||| | Sbjct 5241 AGGCACCGGGGCGCTTGTTA---CCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACA 5185 Query 106977 CGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTAT 107036 | || ||||| |||| |||||| | || || || || || ||| ||| Sbjct 5184 CACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGG 5125 Query 107037 TGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCAC 107096 | || | | |||| | | || ||||| ||||| ||| ||||| |||| Sbjct 5124 TAGCGCGAATGCGGTGGACATTGAGACCGATACCACCAGCGGTCTTGGAGATCATGGCAC 5065 Query 107097 ACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGC 107156 | | | ||||| |||| ||||| | || ||| | | | | | ||||||| Sbjct 5064 AGGTCTTGAGAGTATCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGC 5005 Query 107157 AACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGA 107216 || | | ||| ||| || ||| | |||||||| || || || | |||||| ||| Sbjct 5004 AAGATGCGAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGA 4945 Query 107217 ACATAC-CTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGG 107275 | ||| |||||||||| || ||||||||| | | | |||||||| || ||||| Sbjct 4944 A-GTACTTTTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGA 4886 Query 107276 ATGCCGATGGCCACACGCATAAACATGT 107303 || |||| || |||||||| | || || Sbjct 4885 ATTCCGACAGCAACACGCATCAGCAAGT 4858 >seq45 Length=26065 Score = 118 bits (130), Expect = 1e-21 Identities = 302/453 (67%), Gaps = 29/453 (6%) Strand=Plus/Plus Query 9192 CGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCG 9251 || ||||| || || ||||| | ||| || | ||||| | ||| ||||| || | Sbjct 20336 CGGTCAAATCGTCCGGGACGCATGAGTGCCTTGTCAAGAACATCCGGTCGATTGGTACCA 20395 Query 9252 GCGATGACAACAATACCTGTTTCAT---TATCAAAACCATCCATCTCTGTCAAAAGTTGG 9308 || | |||||| | || ||| ||| |||||||||||||| || | || ||| Sbjct 20396 GCCAAGACAACCA---CTTGCTCAGAGGTATTGAAACCATCCATCTCAGTGAGAATCTGG 20452 Query 9309 TTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTG--CGTTGCT--- 9363 || | ||| ||| |||||||| || | ||||||| | | | ||||| Sbjct 20453 TTGAGAGTGCTTTCACGTTCATCGTTTCC------ACCACCAACGTTCGACTTTGCTCGA 20506 Query 9364 ----TTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCG 9419 |||| | |||||||| ||||||||||||| || || || ||| | |||||| Sbjct 20507 GACTTTCCAATCGCATCAATTTCATCAATGAAGATGATGCAGGGGGTATTCTTCCGGGCG 20566 Query 9420 ATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTT 9479 || | ||||||||||| || | || || ||||| |||||||| || ||||| | Sbjct 20567 GTTGCGAAGAGATCGCGGACACGAGAGGGTCCGACACCGACAAACATTTCGACAAACTCG 20626 Query 9480 G--CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 9537 | | | | ||| || | ||| || || |||||||| ||| |||| || || | Sbjct 20627 GAACCACTG-ACACTGTA-GAAAGGCACGCCGGATTCACCAGCAGTGGCCTTAGCAAGCA 20684 Query 9538 GAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC-- 9595 |||||||| ||||| || ||| | ||| | |||||| || |||||||| || || Sbjct 20685 ATGTCTTACCAGTACCGGGGGGACCTGAGAGAATGGCACCACGAGGAATCTTTGCACCCA 20744 Query 9596 ACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAA 9628 ||||| | | | ||| ||||||| ||| || Sbjct 20745 ACTTC--TCGAACCGCTCGGGTTGCTGGAGGAA 20775 >seq927 Length=85386 Score = 109 bits (120), Expect = 6e-19 Identities = 120/160 (75%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||||||||||||||| ||||| || | || || ||||| || || Sbjct 51954 GCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAGAAAGTGAGACCA 51895 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||| || || |||||||||| ||| | || | | |||||| ||||||||||||||| Sbjct 51894 GGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATA 51835 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 ||||||||| || || |||| || ||| ||||||| Sbjct 51834 CCCTCCACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGG 51795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589972186280320